Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01460 ATGGAAGATAGAGGAAAGAACTCCCATGGCACTCACATTCTGAAAAAATCAAAATCTTTGGATCTGAAGAGTTTATATAAATCAAAAGTGACAAAAGAGACTCCAAACAAGAACTTAAAGAGGAAAGGTAATAGTCCTAGGAGTGGTGATGAGAAAAGTAACAAGAAAAAGGAGGCTAGAAAGGGAGTGTCTCTAAGTAGCTTAAAAATTGCAGATGGTGGTATCAAGAAGATTGTTGATGAAGAATATCACAAAGGGCCTGGTTCTGGTAGGAAGGATTTGAGGGAACCAAAGTTGGAGGCGAGACAGAGATTGAGTAGCAGTAGTGGGCTTAATAGAGTTGCACCAAGTCTTGATGATGATGTTTGTATTCCAAAGCGTAAGAGGGATTTTGTGGGACAGAATAAATTTAAAGATGGTCAAGCACCAAAACTGGCAGGGCAGCCTAGTTGTATAAGTGACCATGGTGATCAGATACCTAAGTTAAGTAGTGATGATTTGGACAGGGGGATTGAGTCTTCAAAGATTAAACAGAAGAAAAAAATTGATGAACTTAAGGAAATTGGGACTGGTGATTCAGATTCAGTTCATAATTTTAAGGGTAATGAGAAGCATGCCTCTCATTCTGTTGTAAATACTGGTGATTCCTCTTCACAGAAGTCACGGAGGAAGGATAGGAAGCGAAAGGCTTTGGCTCCAGATAGAATTAGGGCTTCCAAGTTGGCTGAGCCTCTGATTGGTGGCAGTGAAATATCTGATTATTTGCGGGAAGATGATGAAGAGAATCTCGAGGAGAATGCAGCAAGGATGCTGTCTTCACAGTTTGATCCAAACTGTACTGGGTTTTGTTCCAGTGGCAAGCCTTCTGCATTGCCATCATCAAATGGTTTGTCCCTTTTGCCATCTTCTCATCGAAATGTTATTAGTTGTGGGTCAAAGCCTCAGTGGTCTTCAGTTGATACTGCTGGTAGGGTCTTGAGGCCAAGGAAACACCACAAAGAAAAGGGTAATTCAAGGAAGAGGCATCATTTTTATGAAGCTTCGTCAAGTGATTTGGATGCAAATTGTATTTTGAACCGGAGAATTAAGGTTTTTTGGCCTTCGGAACAAAGCTGGTATCATGGCCTTGTCAATGGCTATGATAAAGAAGCAAAGCTTCACCACATCAAATATGACGATCGAGAAGAAGATTGGATTAATCTCCAAACCGAGAGGTTCAAAATCATGTTACTTCCCAGTGAAGTTCCTAGCAAAGCAGGGTGGAAAAGAGCAGAAAGGAAAGGTAAAATTTCTGATCAGCTAAAGGGGAACAAGTCCAGAAAAGAAAGGCAAAGAAGAGATGTGATTATAGAGGATGATAGCTGTGGTGAAAGCTGTATGGACTCGGAGCCGATAATCTCATGGTTGGCTCGATCTTCTCATCGGTTTAAATCTTCTGTTTTTCATGGTATTAAGAAACATAAAACTTCTGTTACACTTCCGAGTACAGCCTCGTCATTGTTATATGATGAACCTGTAAAAGTACAAGTATGCTTAGCTGAGAGTTCCTTGAGGGAGGGTCAGAATAATCTGCCCGGAGATTCTGTATCACAAGATAAATCAGGTGATAATTTTGGGAAGTCCTCATTGCAAAGCTTCAATTGCCCCAAAGAGGACAAACCACCTATTGTCTATTTTAGAAGGCGGTTTCACAAGCCAACTTCAGTATCACCTCATATCTCTGGACATAAACATGTTAACTTAAGTGCATCTTGTTCCCTTTCATTTGATCCTGTGATTGGTGGGGTTATGGACATAAAAGAACCAAATGATGGGAGGGTTGAGACAGAGGGGCCATTGTGGTTCACATACAATGCGGGAGTATCTAAATTTTTTTTGGACCTGGGGTCGGCAGCATTCAAATTTGACTTGAACTATCCAATACATTTGGTGCTGAATGACTCTTTTAGATCAGAGAATTTGTGGTTGCTCCATGCTGTTCTGCAACTTCAGTATGGTACAATTATTACCCTGTGGCCAAGGGTTCATCTGGAGATGCTTTTTGTTGATAATGTGGTTGGGCTGAGGTTCCTAATATTTGAAGGCTGCTTGAAGATGGCTGCAGCCCTTGTCTTTTGGGTCCTTAGGGTATTTCATCAACCTGCTGACCAAGGAAAGTATATTGACTTGCAACTACCAGTTACATCTATCAGATTCAGGTTTGCAAGTGTTGATCGCATTAAGAAACCTCTCGTGTTTGCATTTTATAACTTCTTCAGAGTGAAGAATTCAAAGTGGATGTACTTAGATTCGAAGCTTAAGAGACATTGCTTACTCAGCAAGCAGCTCCATCTCTCTGAATGCACATATGATAACATTCAGGTACTTCAAAATGGATCAAGTGAGTATCCAAGTACTTCTGTCAGTGGCAAGCCCTCAGTCAAGGCCACGCGGAAGAGGACTAGGCCAGGGATTAATATCATGGGTGTTTCCAGAGAGTTCACCCAGGTTGATATTAGTCAGTCTTCTGATGTTGACAAGAGGGAGGTTCCTCCATTTTCACTATCTTTTGCTGCTGCACCTACATTTTTTGTCAGTTTGCACCTTAAGTTGCTGATGCAAAAGTTAATAGCTCATATAAGCTTCTGTGATCATGCATTAGTAGTTCATCAGGAAGACTCTGGTTTGATGAGAGATGACTGCTGTAGCATTGATGATGGCTCTAAGAGGAATGAATTAAATCCAAATGAAAATATGATCACTTTGTCAAACGATGCTGTGTGTGATGGAGTGACTTGTGCCAAGGCAGATCTGTTAATTGGTCCTTCTAATCGTGGTGGTGGAATTCTCTCTCAAAATTACCAGAAAATTGATCTTAGTGCTGATGGAACTTCTGGATCTGATGGTACTGAGAGACCTGATACTGTTCAATTACTGCAGTGGCAATCTCATCATTCTGACCTATGCTTGTTGCCTTCAAGTTCTGTAACCGATAAGGTTAAAGCCAATGATGGTTCCCATTCTTTTCTGTGTGAATTCAGTGACCAAATTCCTTCAGCTGAACAATTTGAGAAACCTGTTTATGGTGATTTGCATGATACTCAACATTCTTCTGATTTTTCTTGGAATATAAATGGAGGTGGTATTCCCAGCCCCAGTCCAACTGCTCCCAGAAATTCTTGGCATCGGAAAAAAAATGGTTCCTCATCATTAGGTTTCCAGTCACATGGGTGGTCTGATGTGAAGGCTGATTCTCTTTGCTATGGTTTTAGCAACGGACCTAAGAAGCCACGAACCCAAGTATCTTCTTCAGTGCCTTTTGCTGGGTATGATTTTAGTTCAAGGCACAGAAGCCATTACCAGAGGGGGTTGCCTGACAAGCGAATTAGAAAGGCTAATGAGAAGAAGTCCTTGGATGTTGCTAAGGATCCTGAAAAGAATTTGGAGTCCTTATCTTGTGATGCAAATTTGTTGATTACCCTTGATGATAAAGGGTGGAGAGAAGCTGGTGCTCAAGTTGTACTAGAGCTGTTTGACCATAATGAATGGAAACTTTCTGTAAAACTTGCAGGAATCACAAGGTATTCATACAAAGCACACCAGTTTCTGCAGACTGGATCAACAAATCGTCATACACATGCTATCATGTGGAAAGGAGGAAAAGATTGGATCTTAGAATTTCCTGATAGGAGTCAGTGGGCTCTTTTCAAGGAGATGCATCAGGAATGCTACAACCAGAACATCCGTGCTGCCTCTGTTAAAAATATACAGATTCCTGGTGTTGTCTTGATAGAAGAAAATCATGATAATGAATCCGAAGTTACTTTTGTTCGGAGCTCTAAATATTTTCGACAAGTTGAAGCAGATGTAGAGATGGCTCTGAATCCATTGCATGTCCTTTATGACATGGATAGCGAGGATGAGCAGTGGATTTTGACTATTCAAAACTCTGAAAAAGATAGCAGTGGTTTGGATGGGCTCTCGGAGGAGATGTTTGAGAAGACAATGGACCTGTTTGAGAAGGCTGCATATGCTCAGCAGCGTCATCGGTTTACACCTACTGAAATAGAGGAACTCATGGTTAATGTTGAGCTCTTCAGTGTAACCAAAATCATTTATGAACATTGGCAGCAGAGAAGGCAGAAGAAGGGAATGTCTTTAATACGGCATTTTCAGCCACCTCCATGGGAAAGATACCAGCAAGAATTGAGAGAGTGGGAAGTAGCCATGACCAAGAATAATATTCCTATTTCTAATGGGTGCCTGGACAAGGTTTCAACCTTGGAGAAGCCGCCCATGTTTGCTTTCTGTTTGAAACCAAGGGGTTTGGAAGTACTAAACAAGGGATCAAGGCATCGATCACAAAAGAAAGTTTCAGTCTCAGGGCATACAAACAGTATTCTATATGAACAGGATGGTTTCCACCCTTTAGGAAGAAGATTGAATGGATTGGCATCTGGCGATGAGAAGTTTGCATACTCAGGGCATAATTATGATTCTGTTGTTGGTTCCCCATTGCCTCAGACCTCACCAAGGGCATTCTCACCATGTGATGCAGGCAGCATGGGATATTATTCTATGAGCAACTATGGGTATGATAGAAATCATTTCTCCAAATATCAAAGAAGCAAGTCGAGGAAATTTGGCTCATCTGTGTTTCATAATGATTCACAGATGACTTCCTATAGTCAGAGAATTTCAGGGTCAGAGAAGAGAAATGGAGTTAGCAGGTGGAATATGGGCTATCATGACTCATTGAATGGCCCTCGGAGACATGGGGTTGAACAATTGGATGGTTCAGACCTTGATGAATTTAGATTGCGTGATGCCCCAGGTGCTGCTCAGCAGGCACTTGACATGGCCAAATTAAAGAGAGAGAGGGCTCAGAGATTGCTTTATAGAGCAGATATAGCAATTCACAAGGCTGTGGTTGCTCTTATGACTGCTGAAGCAATGAAAACTTCTGACCCTGTGATGATAACTTGA 4965 0.4141 MEDRGKNSHGTHILKKSKSLDLKSLYKSKVTKETPNKNLKRKGNSPRSGDEKSNKKKEARKGVSLSSLKIADGGIKKIVDEEYHKGPGSGRKDLREPKLEARQRLSSSSGLNRVAPSLDDDVCIPKRKRDFVGQNKFKDGQAPKLAGQPSCISDHGDQIPKLSSDDLDRGIESSKIKQKKKIDELKEIGTGDSDSVHNFKGNEKHASHSVVNTGDSSSQKSRRKDRKRKALAPDRIRASKLAEPLIGGSEISDYLREDDEENLEENAARMLSSQFDPNCTGFCSSGKPSALPSSNGLSLLPSSHRNVISCGSKPQWSSVDTAGRVLRPRKHHKEKGNSRKRHHFYEASSSDLDANCILNRRIKVFWPSEQSWYHGLVNGYDKEAKLHHIKYDDREEDWINLQTERFKIMLLPSEVPSKAGWKRAERKGKISDQLKGNKSRKERQRRDVIIEDDSCGESCMDSEPIISWLARSSHRFKSSVFHGIKKHKTSVTLPSTASSLLYDEPVKVQVCLAESSLREGQNNLPGDSVSQDKSGDNFGKSSLQSFNCPKEDKPPIVYFRRRFHKPTSVSPHISGHKHVNLSASCSLSFDPVIGGVMDIKEPNDGRVETEGPLWFTYNAGVSKFFLDLGSAAFKFDLNYPIHLVLNDSFRSENLWLLHAVLQLQYGTIITLWPRVHLEMLFVDNVVGLRFLIFEGCLKMAAALVFWVLRVFHQPADQGKYIDLQLPVTSIRFRFASVDRIKKPLVFAFYNFFRVKNSKWMYLDSKLKRHCLLSKQLHLSECTYDNIQVLQNGSSEYPSTSVSGKPSVKATRKRTRPGINIMGVSREFTQVDISQSSDVDKREVPPFSLSFAAAPTFFVSLHLKLLMQKLIAHISFCDHALVVHQEDSGLMRDDCCSIDDGSKRNELNPNENMITLSNDAVCDGVTCAKADLLIGPSNRGGGILSQNYQKIDLSADGTSGSDGTERPDTVQLLQWQSHHSDLCLLPSSSVTDKVKANDGSHSFLCEFSDQIPSAEQFEKPVYGDLHDTQHSSDFSWNINGGGIPSPSPTAPRNSWHRKKNGSSSLGFQSHGWSDVKADSLCYGFSNGPKKPRTQVSSSVPFAGYDFSSRHRSHYQRGLPDKRIRKANEKKSLDVAKDPEKNLESLSCDANLLITLDDKGWREAGAQVVLELFDHNEWKLSVKLAGITRYSYKAHQFLQTGSTNRHTHAIMWKGGKDWILEFPDRSQWALFKEMHQECYNQNIRAASVKNIQIPGVVLIEENHDNESEVTFVRSSKYFRQVEADVEMALNPLHVLYDMDSEDEQWILTIQNSEKDSSGLDGLSEEMFEKTMDLFEKAAYAQQRHRFTPTEIEELMVNVELFSVTKIIYEHWQQRRQKKGMSLIRHFQPPPWERYQQELREWEVAMTKNNIPISNGCLDKVSTLEKPPMFAFCLKPRGLEVLNKGSRHRSQKKVSVSGHTNSILYEQDGFHPLGRRLNGLASGDEKFAYSGHNYDSVVGSPLPQTSPRAFSPCDAGSMGYYSMSNYGYDRNHFSKYQRSKSRKFGSSVFHNDSQMTSYSQRISGSEKRNGVSRWNMGYHDSLNGPRRHGVEQLDGSDLDEFRLRDAPGAAQQALDMAKLKRERAQRLLYRADIAIHKAVVALMTAEAMKTSDPVMIT* 1655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01460 1654 MobiDBLite consensus disorder prediction 1041 1066 - -
Rops10g01460 1654 MobiDBLite consensus disorder prediction 1 63 - -
Rops10g01460 1654 MobiDBLite consensus disorder prediction 159 204 - -
Rops10g01460 1654 MobiDBLite consensus disorder prediction 120 135 - -
Rops10g01460 1654 MobiDBLite consensus disorder prediction 74 102 - -
Rops10g01460 1654 Gene3D - 359 404 - -
Rops10g01460 1654 PANTHER ENHANCER OF POLYCOMB 1013 1647 IPR024943 GO:0006357|GO:0032777|GO:0035267
Rops10g01460 1654 MobiDBLite consensus disorder prediction 1 236 - -
Rops10g01460 1654 CDD Tudor_Agenet_AtEML-like 358 408 - -
Rops10g01460 1654 Pfam Enhancer of polycomb-like 1237 1334 IPR019542 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01460 Rops-Chr10 27865208 27871859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01460 - - vun:114163981 2235.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01460 10 27865208 27871859 Rops10g01460 10 27865208 27871859 ECH
Rops9g01852 9 33395503 33403740 Rops10g01460 10 27865208 27871859 PCT