Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01712 ATGGTTGAACGCGCCACGAGCGACTTGCTCATAGGTCCCGATTGGGCCAGGAACATCGAGATCTGTGATATGCTCAATCATGACCCTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAAAATTCAAAAGTTCAACTTCTTGCACTAACTTTGCTGGAGACAATCATAAAGAACTGTGGGGACATTGTTCACATGCATGTTGCAGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGTAAAGAAAAAGCCTGATTTGCGTGTCAAGGAGAAGATACTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGGCCAAGGGCAAGATATCCAGAATATTATGCTGCATACCAGGAACTGTTGCGTGCCGGGGCAGTATTCCCTAAGAGGTCTGAACAATCTGCACCTGTATTCACTCCTCCTCAAACACAACCATTGACTTCATACCCTCCAAATATACGCGACTCAGATGCTCGGCAGGACACAGCTGAGTCCTCTGCAGAGGCTGAGTTTCCAACGCTAAGTTTGACTGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTTCAGAAATGCTCAACGCATTAGACCCTAGTAACAAAGAAGGGCTCAGACAGGAGGTTATTGTTGATTTGGTGGACCAGTGTCGAACATACAAGCAGAGAGTGGTACACCTTGTTAACTCAACTTCGGATGAATCACTGCTATGTGAAGGACTAGCTCTGAATGATGATCTGCAGCGTGTACTGGCCAAGCATGAATCTATTTCTTCAGGAAGTTCTACTCAAAATGAAAATCACGCAGAGAATTTGAAACCTGCGCCTGCTGGAGCACTTGTAGATATTGATGCTCCTTTGGTTGATACAGGAGATACTAGCAAACAAACTGATGGGAGTGCTGAAGCAGGGTCCCAAACATTGAATCAGTTATTGCTTCCTGCGCCACCTACATCTAACGGTTCAGCTATCCCTGCCAAGGCCGATCCCAAATTGGACCTGCTCAGTGGTGATGACTTTAACTCGCCAAAAGCTGATACTTCACTTGCTCTTGTTCCTCTAGGAGAACAACAGCCTGCCAGTCCTGTCTCTCAGCAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAACAATGCACCTACATCTGTCAATACCCAGCCAACCACTGTTGCTGGCCAAACCAGTCCATTTGCTCCCCAAGTTCAACAACAGCAGACCTTCATATCTCAAGGGGGATTTTACCCCAATGGAAGTGTGCCAAATGCTGGTTCACTTCAGTACGAGCAACGAGCTGGTCCTGCCTGGAATGGTCAGGTTGCAGAGCAGCAACAGCCATCTTCGCCTGGTTATGGTGCACAAAGCAGTGGATCATTACCACCACCTCCCTGGGAATCTCAACCGGCAGATAATGGCAGTCCAGTAGTGGGAGCTCAGTATCCACAACCTCCGCATTTACAGGGTGCCGCACATCCTCAGGGGCCTCAAGCAATGGGCACTGACCAGGCTTTTGGTATGTATATGCAGCCAAATGCTAACAGCCATATGTCAGCAATCAATAACCATGTTGGGAGCAGTCAATTGGGCATGCACCCTCAGCATATTCAAGGTGTTGCAGGGCCCTACATGGGTATGGCTTCACATCAAATGCAAGCTGGTCCTGGGGTTTCCATGTATCCTCAACAGATGTATGGAAACGGATATGTGGGATATGGCTACGGTCAGCAGCAAGGAGTTCCATACATTGAGCAGCAAATGTATGGTATGTCTGTCAGAGATGATAGTGGTTTGAGAAACTCTTACCCGGTTTCTACCACATCTTACGTTCCATCTGGGAAGCCTTCCAAGCCAGAGGACAAGTTATTTGGAGACCTTGTTAACATGGCAAAAGTGAAGCCAAAACCTTCTACTCCAGGCCGAGCTGGTAGCATGTAA 1953 0.4665 MVERATSDLLIGPDWARNIEICDMLNHDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDLRVKEKILILIDTWQEAFGGPRARYPEYYAAYQELLRAGAVFPKRSEQSAPVFTPPQTQPLTSYPPNIRDSDARQDTAESSAEAEFPTLSLTEIQNARGIMDVLSEMLNALDPSNKEGLRQEVIVDLVDQCRTYKQRVVHLVNSTSDESLLCEGLALNDDLQRVLAKHESISSGSSTQNENHAENLKPAPAGALVDIDAPLVDTGDTSKQTDGSAEAGSQTLNQLLLPAPPTSNGSAIPAKADPKLDLLSGDDFNSPKADTSLALVPLGEQQPASPVSQQNALVLFDMFSNGNNAPTSVNTQPTTVAGQTSPFAPQVQQQQTFISQGGFYPNGSVPNAGSLQYEQRAGPAWNGQVAEQQQPSSPGYGAQSSGSLPPPPWESQPADNGSPVVGAQYPQPPHLQGAAHPQGPQAMGTDQAFGMYMQPNANSHMSAINNHVGSSQLGMHPQHIQGVAGPYMGMASHQMQAGPGVSMYPQQMYGNGYVGYGYGQQQGVPYIEQQMYGMSVRDDSGLRNSYPVSTTSYVPSGKPSKPEDKLFGDLVNMAKVKPKPSTPGRAGSM* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01712 650 SUPERFAMILY ENTH/VHS domain 1 134 IPR008942 -
Rops9g01712 650 Gene3D - 1 151 IPR008942 -
Rops9g01712 650 Gene3D - 180 271 IPR038425 -
Rops9g01712 650 MobiDBLite consensus disorder prediction 316 345 - -
Rops9g01712 650 CDD GAT_GGA-like_plant 184 262 - -
Rops9g01712 650 ProSiteProfiles VHS domain profile. 5 134 IPR002014 GO:0035091|GO:0043130
Rops9g01712 650 SMART VHS_2 1 130 IPR002014 GO:0035091|GO:0043130
Rops9g01712 650 MobiDBLite consensus disorder prediction 443 461 - -
Rops9g01712 650 MobiDBLite consensus disorder prediction 138 177 - -
Rops9g01712 650 MobiDBLite consensus disorder prediction 607 626 - -
Rops9g01712 650 PANTHER TOM1-LIKE PROTEIN 1 643 IPR044836 GO:0035091|GO:0043130|GO:0043328
Rops9g01712 650 FunFam TOM1-like protein 2 1 144 - -
Rops9g01712 650 SUPERFAMILY GAT-like domain 135 265 - -
Rops9g01712 650 CDD VHS 1 128 - -
Rops9g01712 650 Pfam VHS domain 2 114 IPR002014 GO:0035091|GO:0043130
Rops9g01712 650 ProSiteProfiles GAT domain profile. 176 264 IPR004152 GO:0035091|GO:0043130
Rops9g01712 650 MobiDBLite consensus disorder prediction 141 161 - -
Rops9g01712 650 Pfam GAT domain 190 264 IPR004152 GO:0035091|GO:0043130
Rops9g01712 650 MobiDBLite consensus disorder prediction 440 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01712 Rops-Chr9 30052993 30061062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01712 - - gmx:100809022 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01712 9 30052993 30061062 Rops9g01712 9 30052993 30061062 ECH
Rops9g01712 9 30052993 30061062 Rops10g01987 10 36277848 36287711 PCT