Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01552 ATGAAAACTCGTAGCTCTTCCAAAATCTCTGCAAAATGGGTTCCCATTTTCTCTGTTTTTTCCTTCATACTTGGAATGCTCATCACAAGCAGCAGGATATGGGAACTACCTGAATCCAATGGCAAGTTTCTGTCAAATCGTCGGCATGAACAAGAAATTCAAGTTGTCTCAGGAGATTGTGCTACTAAAAAGAAGCAGCCTTTGCAGGATAAGGATGTAATGGATGAAGTATACAAAACCCATGAAGCCATTCGGCATGTCAGATCTCTAGACAAGCAAGTTTCCATGCTTCAGATGGAACTTGCAGCATCTAGGAGTACAAGAGAACCAGGGATCTCAGATAGTTCAGGTAACAACTTGGGCTCAGAGCTCTCTACTGAAGGCCCTTCAAGGAAGAAAGTGTTTATAGTGATTGGCATAAACACAGCTTTCAGTAGTAGGAAACGGCGCGATTCGGTTAGAGAGACTTGGATGCCTCAAGGTGAACAACTTCTTCGATTGGAACGTGAGAAAGGAATCGTCGTCAGATTCATGATTGGTCACAGCGCAACTTCCAACAGCATTTTAGATCGAGCTATTGATTCAGAAGAAGCCCAGCACAATGACTTCCTTCGCCTGGAACATGTTGAAGGGTATCATGAATTGTCTGCAAAGACAAAAATTTTCTTTTCTACTGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTCCATGTCAATTTAGGTGTACTGGCAACAACCCTTGCTCGTCATCGTTCAAAACCCAGGGTCTACATCGGATGCATGAAATCTGGACCTGTTCTTTCTCGAAAGGATGTTAAGTATCATGAACCTGAGTTTTGGAAATTTGGAGAGGAGGGAAACAAATACTTCCGACATGCAACTGGGCAGATATATGCACTCTCTAAGGATCTGGCCACTTACATTTCCATCAACCAGCCTATATTGCACAAATATGCCAATGAAGATGTCTCGCTTGGTTCATGGTTCATTGGTCTGGAAGTTGAGCATATTGACGAGCGCAGTATGTGCTGTAGGACTCCTCCAGATTGTGAGTGGAAAGCGCAAGCGGGTAACATATGTGTTGCATCCTTTGACTGGAGCTGCAGTGGAATCTGTAAGTCAGTGGAGAAGATTAAATTTGTCCACTCAAGGTGTGGTGAAGGGGATGGAGCTGTATGGAGTGCTTTAGTTTAG 1212 0.434 MKTRSSSKISAKWVPIFSVFSFILGMLITSSRIWELPESNGKFLSNRRHEQEIQVVSGDCATKKKQPLQDKDVMDEVYKTHEAIRHVRSLDKQVSMLQMELAASRSTREPGISDSSGNNLGSELSTEGPSRKKVFIVIGINTAFSSRKRRDSVRETWMPQGEQLLRLEREKGIVVRFMIGHSATSNSILDRAIDSEEAQHNDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYALSKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDERSMCCRTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKFVHSRCGEGDGAVWSALV* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01552 403 Pfam Domain of unknown function (DUF4094) 10 106 IPR025298 -
Rops9g01552 403 MobiDBLite consensus disorder prediction 108 126 - -
Rops9g01552 403 Pfam Galactosyltransferase 148 344 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops9g01552 403 MobiDBLite consensus disorder prediction 103 127 - -
Rops9g01552 403 Gene3D - 125 354 - -
Rops9g01552 403 FunFam Hexosyltransferase 128 349 - -
Rops9g01552 403 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 91 344 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01552 Rops-Chr9 26684643 26688405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01552 1 403 Glycosyltransferase AT1G77810 70.864 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01552 K20855 - gmx:100793793 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01552 9 26684643 26688405 Rops9g01552 9 26684643 26688405 ECH
Rops9g01552 9 26684643 26688405 Rops10g01840 10 34081324 34090173 PCT