Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01840 ATGAAGACTCGACCCTCCACCAAAATCTCTGCAAAATGGGTTCCCATTTTCTCTGTCTTTTCCTTCCTTATTGGTATGCTCGTCACAAGCAGGATGTGGGAGCCACCTGAATCAAAGGGTCTGCTGATTTCTCAGCATCAGCGTGATCAAGAACTGCAAGTGATCTCAGGGGATTGTGCTACCAAAAAGAAGCAGCCTAAGGATAAAATGGATGAATTGTACAAAACCCATGAAGCCATTCAGCGTGTCAGAGCTCTAGACAAGCAAGTTTCCATGCTTCAGATGGAATTAGCAGCAGCTAGGAGTTCTCGTGAAACCAAGATCTCGGATTCGGATGGCTTAACCAACAACACTTCAGGGCTCTCTGGTGACGGTTCTCCAAGGAAGAAGGCATTTATAGTGATAGGGATAAACACAGCTTTCAGTAGCAGGAAGCGGCGTGATTCAGTTAGAGAGACTTGGATGCCTCAAGGGGAACAACTTCTTCAATTGGAAAGGGAGAAGGGAATTGTTATCAGATTCATGATTGGCCACAGTGCAACTTCCAACAGCATCCTAGATCGAGCTATCGATTCAGAAGAAGCCCAGCACAAAGACTTCCTTCGCCTGGAACACGTCGAAGGGTATCATGAACTCTCTGCAAAGACAAAAATTTTCTTTTCTACTGCAGTTGCAATGTGGGATGCTGATTTCTATGTCAAGGTGGATGATGATGTCCATGTCAATTTAGGTGTCCTGGCGGCAACCCTTGCTCGTCATCGTTCAAAACCCAGGGTCTACATTGGGTGTATGAAATCTGGACCTGTTCTTTCTCGAAAGGATGTCAAGTACCGTGAACCTGAATTTTGGAAGTTCGGAGAAGAGGGGAACAAATACTTCCGACATGCAACTGGGCAGATATATGCAATCTCTAAGGATTTGGCCACTTACATTTCCATCAACCAGCCGATTTTGCATAAATATGCTAATGAAGATGTCTCACTTGGTTCATGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAGTATGTGCTGTGGAACTCCTCCAGATTGTGAGTGGAAGGCGCAAGCAGGTAACATATGTGTTGCATCGTTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTCCACTCAAAATGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1203 0.4489 MKTRPSTKISAKWVPIFSVFSFLIGMLVTSRMWEPPESKGLLISQHQRDQELQVISGDCATKKKQPKDKMDELYKTHEAIQRVRALDKQVSMLQMELAAARSSRETKISDSDGLTNNTSGLSGDGSPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAMWDADFYVKVDDDVHVNLGVLAATLARHRSKPRVYIGCMKSGPVLSRKDVKYREPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01840 400 MobiDBLite consensus disorder prediction 102 126 - -
Rops10g01840 400 FunFam Hexosyltransferase 125 346 - -
Rops10g01840 400 Pfam Domain of unknown function (DUF4094) 10 103 IPR025298 -
Rops10g01840 400 MobiDBLite consensus disorder prediction 109 124 - -
Rops10g01840 400 Pfam Galactosyltransferase 145 342 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops10g01840 400 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops10g01840 400 Gene3D - 125 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01840 Rops-Chr10 34081324 34090173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01840 1 400 Glycosyltransferase AT1G77810 72.525 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01840 K20855 - gmx:100776715 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01840 10 34081324 34090173 Rops10g01840 10 34081324 34090173 ECH
Rops9g01552 9 26684643 26688405 Rops10g01840 10 34081324 34090173 PCT