Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01542 ATGGAAAAGGAAGAGATAGTGGAGACTAATGAGGCAAGTTCTCGAGGTGTTGGAGAGCCTGAAGGAGATGCTATTACTGCTCGGAATGAGGATCGGGACAAACAATCAAATGGGGTGGAAACTCCAAATGTTGGCCATGATGGCCCTGAGTTTGGCAATGAACAAGATGGTACATCAGACAAGATAAGATCTCAAGATGATGAAAAGCTCAAAGGAGATGCTTTTACCATTCAGAATGAAGACCATGACAAAGATTTAAAGGAGGGAAAAAGGCAAGATATTGTTCATGATGGCCCCGGGATTGACGAAGAGCCAGATGATATACCAGACAAGATATATGAGGTGATAGATGTCAAGTCGAATACTCATGAGGAGGTGAAAGACAATGAGACCGGAGAATCTGAGTTGGCTCAGAGGATGGATGAGAGTAGGGATTTGCAGTGTGGACCTCAAGAAGAAAACTTGGAGACCAGTAGTAGTATTGTTCCTGATGACTTGTTTCAGAAGGTGCATGAGAGTAATTCCATGAAATCTGAAATTCAAGACAATATTGTTGGACGAGAGTATTCTGGTGTTAACATGGACAGCAGTGGAGATTTTGAGTCTACAAGTAAAGAAGTAAATCTAGATAATAATTTTGGACATGGTGACTTGAGTGAAGAGAAGGATGACAGTAGAAGCATGGAATCAACACAAATGAATCAAAAGACAGATAACACTTCAAATAAGGACAATAATTTGGAACCTGTATTTGATGGAAGAGAAGTTCTTGGGGTGGAAGTTAGCCAGAGCACAACTACCCCTACTCCAGATGCCGGTCTGGGGACTCCACATGTGGTTGAGAAGGCTGTATCTCTTAAAAACTTTGTTAGGGCAAAAAGTGCAGTAGCATTCTCTGCTTTGCTACGTCGCCTTTCTGGAAAAATTGATGAAGCTGATGTGGGTAATTCTGATGATGTGGGTAAGGGTGTTTCAGATTTATCCAGAGACAGTGAATCCAAAGAGGTTGTTGAGAAGACAGTGGAGAAAACGACTTGGAATCCCTTAAATTATATTAAAATGTCATCTGATGTTGATGCAGAAAATAAAACTGATCAGAGGGAGGAACCGGTAACTGAAAGTCTGCTGCAACCTATAGCCATGAAAGGAAGGATTATACTGTACACAAGATTAGGGTGCCAAGAATCTAAAGAGGTTAGGCAATTTTTGTATATGAAAAGGCTTAGATATGTTGAAATCAATATTGATGTGTACCCTAGTAGAAAGATGGAGCTGGAGAAAATCTCAGGATCTACTTCTGTGCCCATGGTATTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTAAAGACCTTAAATGAGTCTGGCAAGCTTGATGAGAAGATTGACTATCTTATTACTGAAGCACCATCATTTGAAGGCCCATTTCCACCACTTTCTGGAGAGGATGATGTATCCAGTAGTGGGGCTCTAGATGAAATGGCTTTGATTGTCCGCAAAATGAAAGAATCTATTGTTGTGAAGGACCGATTTTGCAAAATGCGAAGGTTCACTAACTGCTTTCTTGGCTCTGAAGCTGTGGACTTCTTATCAGAAGATCAATATTTGGAAAGGAAAGAGGCTGTTGAGTTTGCACGAAAGCTTGCCAGCAAACTCTTCTTTCAGCACATTCTAGATGAGATTCTATTTGAAGATGGTAATCACTTGTATCGGTTTTTGGATGATGATCCAATTGTGGCATCTCAGTGTCACAACATTCCAAGGGGGATAACTACAGTGAAACCTAAGCCTATCACAGACATTGCATCAAGGCTGAGATTTTTGTCGTATGCAATGTTTGAAGCCTATGCCTCTGAAGATGGACGTCACGTTGATTACAGAAGTATGCATGGAAGTGAGGAGTTTGCAAGGTATCTAAGAATAGTAGAAGAGCTCCAAAGAGTGGAAATAGGGAATTTGTCTAGAGAAGAGAAGCTTGCTTTCTTTATTAATCTATATAATATGATGACCATCCATGCAATCTTAGTATGGGGTCATCCAGCTGGAGCACTGGAAAGAAGAAAATTGTTTGGAGACTTCAAATACGTTATTGGTGGGTCCACTTACTCACTTTCAGTTATTCAGAATGGCATTTTGAGGGGGAACCAACGACCACCATATAGCCTTATGAAGCTATTTGGTGCAAAAGATAAACGTTCCAGGGTGGCCCTCCCTTTCCCTGAGCCTCTTATTCATTTTGCTTTAGCATGTGGTTCTCGATCCGGGCCTGCACTTCGATGCTATTCTCCAGGGGACATCGACAATGAATTAATGGATGCAGCCCGCAATTTCTTAAGAAGTGGGGGCCTTTTCATAGATTTTACTGCAAAGGTTGCATATGCCAGTATGATCCTTAAATGGTTTAGTGTAGATTTTGGCAAGAATGAAGTAGAGGTACTAAAGCATATGTCAAATTACTTAGATCCAGCTGACTCAGAATTATTATTGGACCTGCTTGCCACTTCTGAGTTGAAGGTGATATATCAGCCTTATGACTGGGGCTTGAATTGCTAG 2556 0.4096 MEKEEIVETNEASSRGVGEPEGDAITARNEDRDKQSNGVETPNVGHDGPEFGNEQDGTSDKIRSQDDEKLKGDAFTIQNEDHDKDLKEGKRQDIVHDGPGIDEEPDDIPDKIYEVIDVKSNTHEEVKDNETGESELAQRMDESRDLQCGPQEENLETSSSIVPDDLFQKVHESNSMKSEIQDNIVGREYSGVNMDSSGDFESTSKEVNLDNNFGHGDLSEEKDDSRSMESTQMNQKTDNTSNKDNNLEPVFDGREVLGVEVSQSTTTPTPDAGLGTPHVVEKAVSLKNFVRAKSAVAFSALLRRLSGKIDEADVGNSDDVGKGVSDLSRDSESKEVVEKTVEKTTWNPLNYIKMSSDVDAENKTDQREEPVTESLLQPIAMKGRIILYTRLGCQESKEVRQFLYMKRLRYVEINIDVYPSRKMELEKISGSTSVPMVFFNEILIGGLSELKTLNESGKLDEKIDYLITEAPSFEGPFPPLSGEDDVSSSGALDEMALIVRKMKESIVVKDRFCKMRRFTNCFLGSEAVDFLSEDQYLERKEAVEFARKLASKLFFQHILDEILFEDGNHLYRFLDDDPIVASQCHNIPRGITTVKPKPITDIASRLRFLSYAMFEAYASEDGRHVDYRSMHGSEEFARYLRIVEELQRVEIGNLSREEKLAFFINLYNMMTIHAILVWGHPAGALERRKLFGDFKYVIGGSTYSLSVIQNGILRGNQRPPYSLMKLFGAKDKRSRVALPFPEPLIHFALACGSRSGPALRCYSPGDIDNELMDAARNFLRSGGLFIDFTAKVAYASMILKWFSVDFGKNEVEVLKHMSNYLDPADSELLLDLLATSELKVIYQPYDWGLNC* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01542 851 MobiDBLite consensus disorder prediction 150 164 - -
Rops9g01542 851 ProSiteProfiles Glutaredoxin domain profile. 373 470 - -
Rops9g01542 851 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 88 851 - -
Rops9g01542 851 Gene3D Glutaredoxin 380 465 - -
Rops9g01542 851 CDD DEP 498 572 - -
Rops9g01542 851 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 506 573 IPR000591 GO:0035556
Rops9g01542 851 MobiDBLite consensus disorder prediction 120 249 - -
Rops9g01542 851 SMART DEP_3 502 575 IPR000591 GO:0035556
Rops9g01542 851 Pfam Glutaredoxin 385 441 IPR002109 -
Rops9g01542 851 MobiDBLite consensus disorder prediction 195 210 - -
Rops9g01542 851 MobiDBLite consensus disorder prediction 230 247 - -
Rops9g01542 851 SUPERFAMILY Thioredoxin-like 376 464 IPR036249 -
Rops9g01542 851 Pfam Protein of unknown function, DUF547 653 779 IPR006869 -
Rops9g01542 851 MobiDBLite consensus disorder prediction 1 107 - -
Rops9g01542 851 Gene3D - 488 580 IPR036388 -
Rops9g01542 851 SUPERFAMILY "Winged helix" DNA-binding domain 493 583 IPR036390 -
Rops9g01542 851 MobiDBLite consensus disorder prediction 53 107 - -
Rops9g01542 851 MobiDBLite consensus disorder prediction 215 229 - -
Rops9g01542 851 ProSiteProfiles DEP domain profile. 502 575 IPR000591 GO:0035556
Rops9g01542 851 MobiDBLite consensus disorder prediction 120 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01542 Rops-Chr9 26471225 26476875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01542 - - ccaj:109814814 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01542 9 26471225 26476875 Rops9g01542 9 26471225 26476875 ECH
Rops9g01542 9 26471225 26476875 Rops10g01829 10 33975413 33979865 PCT