Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01829 ATGGAAAATCAACGATTAGTGGAGACAAAGGAAGCTATTTCTCAAGATGTTGAGAAGTTGCGAGTTGATGCTCTTGCCATTCAGAATAATGAAGATCAGGATCAACAATCAAAGGAGGTAAAAACTCAGAATATTGTTGGTCGTGATGACCCCGGACTAGATGATATATCAGATGTCATAAATGACAAGAAAGATGTAGACGATGTTGTTGGAGAATCTGAATTGGTTCAGAGGAAAGATGAGAATAAGGATTTGTTGCAGTCTGGAACTCAACAAGAAAACTTAGAGACTCGATCTGAAACTGAAGTCAATACTGTTGGGCAAGAATATTCTACTGGTGATAAGGCGGATGCAAGTGCAGATTTTGAACCTAAAAGTCAAGAAACAAATCTAGAAAATAATTCTGGGCAGAAATACTTGGCTAAAGAGGAGGTTGACAGTGGAGACATGGAATTAACACACGTGGATCAAAAGACAGATGAAATTCCAAGTGAGGAACACAATTTGGAGCCTGTATTTGATGGAACCGAGGTTCCAGGGATGGAAGCTAACCGGAGCTCATCTAGCAGTAAGTTGGATGCAGATCAGGACAGTCCAGGTGTGGTTGAGAAAGCAGTGGCTCTTAAAAATTTTGTCAAGGAGAAAAGTGCAGTAGCAGTGTCCACTATGTTGCGTCGCCTTTCTGGAAAGAGTGATGAAGGTGCTGTGGGTAATTTTGATGATGAAAGTAAGGATGTCTCAGACATATCAGAAGTTAGTGAAACCAAAGCAGTTTCTGGGAAGGCAGTGGAGAAATTTACTTGGAATCCCTTAAATTATATTAAGAAATCATCTGATGTTGATGTGGAAAACAAAACTGAGCAGGGGGATTCAATGACAGAAGGTCCATCACCACCCATAGCCATGAAAGGAAGGATTTTACTGTACACAAAACTAGGGTGCCAAGAATCTAAAGCGATCAGGCTATTTTTACGTACAAAAAGGCTTAGATATGTAGAAATCAACATAGATGTATATCCCAGTAGAAAGATGGGGCTGGAGAAGATTTCTGGATCTACTTCTGTTCCCAAGGTTTTTTTCAATGAAATACTTATTGGAGGCTTGAATGAGCTAAAGACCTTAGATGAGTCTGGCAAGCTTAATGAGAAGATTGACTTTCTTATTACTGAAGCACCGTTATTTGAAGCCCCATCACCACCTCTTTCTGGAGAGGATGATGTGTCCAGTGGTGAGGCACTTGATGAATTGGCTCTTATTGTCCGCAAAATGAAAGAATCTATTGCTGTGAAGGACCGATTGTACAAAATGCGTAGGTTCACCAACTGTTTTCTTGGTTCGGAAGCTGTAGACTTCTTATCAGAAGATCAATATTTGGAAAGGCAAGAGGCTGTTGAATTTGCACGAAAGCTTGCTAGCAGACTCTTCTTTCGACATGTTCTAGATGAGGATCTATTTGAGGATGGCAATCACTTGTATCGGTTTTTGGATGATGATCCAATTGTGGTGTCACAATGTCATAACATTCCTAGGGGCATAATTACCATGAAGCCCAAGCCTATAACAGAAATTGCATCAAGGCTTAGGTTTCTGTCCTATGCAATGTTTGAAGCCTATGTTTCTGAAGATGGACGTCGTGTTGATTATACAAGTATACATGGAAGTGAGGAGTTTGCAAGGTATCTGAGAATAGTCGAAGAACTCCAAAGAGTGGAAATGTGGGATTTGTCTAGAGAAGAGAAGCTTGCGTTCTTTATTAATCTTTATAATATGATGGTCATCCATGCCATCTTAGTGTTGGGTCATCCAGATGGAGCACTGGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATTGGTGGGTCTACCTACTCACTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCAGCGACCGCCATATAACCTTAAGAAGCCATTTGGGGCAAAAGATAAACGCTCAAAGGTGGCACTCCCTTACCCTGAACCTCTTATTCATTTTGCTTTGGTATATGGTACCCGATCTGGGCCTGCACTTCAGTGCTATTCTCCTGGAAATATTGACCAAGAATTATTGGATGCAGCCCGTAATTTCTTGAGAAATGGAGGTGTTGTAATTGATTTGACTGCAAAGGTTGCATATGCTAGTAAGATCCTTAAATGGTATAGTACAGATTTTGGCAAGAGCGAGGTAGAGGTGATCAAACATGTGTCCAACTATTTAGATCCAGCTGACTCAGAAGTATTACTGGACCTGCTTGCTACTTCTGAGTTGAAGGTGACATATCAGCCTTATGACTGGGGTTTGAACTGCTAG 2319 0.4062 MENQRLVETKEAISQDVEKLRVDALAIQNNEDQDQQSKEVKTQNIVGRDDPGLDDISDVINDKKDVDDVVGESELVQRKDENKDLLQSGTQQENLETRSETEVNTVGQEYSTGDKADASADFEPKSQETNLENNSGQKYLAKEEVDSGDMELTHVDQKTDEIPSEEHNLEPVFDGTEVPGMEANRSSSSSKLDADQDSPGVVEKAVALKNFVKEKSAVAVSTMLRRLSGKSDEGAVGNFDDESKDVSDISEVSETKAVSGKAVEKFTWNPLNYIKKSSDVDVENKTEQGDSMTEGPSPPIAMKGRILLYTKLGCQESKAIRLFLRTKRLRYVEINIDVYPSRKMGLEKISGSTSVPKVFFNEILIGGLNELKTLDESGKLNEKIDFLITEAPLFEAPSPPLSGEDDVSSGEALDELALIVRKMKESIAVKDRLYKMRRFTNCFLGSEAVDFLSEDQYLERQEAVEFARKLASRLFFRHVLDEDLFEDGNHLYRFLDDDPIVVSQCHNIPRGIITMKPKPITEIASRLRFLSYAMFEAYVSEDGRRVDYTSIHGSEEFARYLRIVEELQRVEMWDLSREEKLAFFINLYNMMVIHAILVLGHPDGALERRKLFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSKVALPYPEPLIHFALVYGTRSGPALQCYSPGNIDQELLDAARNFLRNGGVVIDLTAKVAYASKILKWYSTDFGKSEVEVIKHVSNYLDPADSEVLLDLLATSELKVTYQPYDWGLNC* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01829 772 ProSiteProfiles Glutaredoxin domain profile. 294 391 - -
Rops10g01829 772 MobiDBLite consensus disorder prediction 87 112 - -
Rops10g01829 772 Gene3D Glutaredoxin 301 386 - -
Rops10g01829 772 MobiDBLite consensus disorder prediction 51 86 - -
Rops10g01829 772 SMART DEP_3 423 496 IPR000591 GO:0035556
Rops10g01829 772 Gene3D - 410 500 IPR036388 -
Rops10g01829 772 MobiDBLite consensus disorder prediction 181 195 - -
Rops10g01829 772 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 427 494 IPR000591 GO:0035556
Rops10g01829 772 Pfam Protein of unknown function, DUF547 574 700 IPR006869 -
Rops10g01829 772 MobiDBLite consensus disorder prediction 27 199 - -
Rops10g01829 772 CDD DEP 415 493 - -
Rops10g01829 772 ProSiteProfiles DEP domain profile. 423 496 IPR000591 GO:0035556
Rops10g01829 772 MobiDBLite consensus disorder prediction 142 172 - -
Rops10g01829 772 Coils Coil 3 23 - -
Rops10g01829 772 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 64 772 - -
Rops10g01829 772 Pfam Glutaredoxin 306 362 IPR002109 -
Rops10g01829 772 MobiDBLite consensus disorder prediction 123 137 - -
Rops10g01829 772 SUPERFAMILY "Winged helix" DNA-binding domain 414 500 IPR036390 -
Rops10g01829 772 SUPERFAMILY Thioredoxin-like 303 384 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01829 Rops-Chr10 33975413 33979865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01829 - - gmx:100820242 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01829 10 33975413 33979865 Rops10g01829 10 33975413 33979865 ECH
Rops9g01542 9 26471225 26476875 Rops10g01829 10 33975413 33979865 PCT