Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01476 ATGGCGGCTATTTCCTCCACTGCTAACTCTCTCATCTCATCCTCCAAATCCTCAATCTCTCCAACTCATTCCTTTGTTCATTCCACAAAACTCAACCAATCTTCATTCCCTGGGCCTGGGCCTAGGCCTAAGCCTTCCATTCTGGCCGTCCACGCCGCTGAGCCCGCGAAGAACCCAGTGGTCTCCGACAAGCCACCGAAGGCTCAACCGGCGGTGGTGCCGGGCCGAAATGCCGGGCCGGACCAGGGAAAATGGATCATTGACAGCTGGAAATCGAAGAAGGCCCTGCAGCTGCCGGAATACCCGAGCCAGGAGGAACTTGAGTCGGTGCTGAAGACGCTGGAGGATTTCCCTCCAATCGTGTTCGCCGGTGAGGCGAGGACCCTTGAGGAGCATTTGGGTGAGGCTGCTTTGGGAAATGCCTTCCTTCTTCAAGGTGGAGACTGTGCTGAAAGCTTCAAGGAGTTCAATGCCAATAACATTCGCGACACCTTCAGAATCATCCTCCAGATGAGTGTTGTCATGATGTTTGGAGGCCAAATGCCTATCATTAAGGTGGGAAGAATGGCGGGTCAATTCGCGAAGCCGAGATCCGACTCGTTTGAGGAGAAAAATGGTGTGAAATTGCCGAGTTACAGAGGGGATAACATAAACGGTGATTCATTTGATGAGAAGTCAAGGATTCCAGATCCACAGAGGATGATTAGAGCTTATTGTCAAGCTGCTGCTACTTTGAATCTTCTAAGAGCTTTTGCAACCGGAGGTTATGCTGCTATGCAGAGGGTCACTCAATGGAATTTGGATTTCACAGTGCACAGCGAGCAAGGAGATAGGTACCGAGAACTTGCCAATCGAGTTGATGAGGCCCTTGGATTCATGGCTGCTGCTGGACTCACAGTGGACCATCCCATAATGAAAACAACTGAATTCTGGACATCTCATGAATGCTTGTTGTTGCCATATGAACAATCACTCACCAGGTTGGATTCAACCTCTGGTCGCTACTATGACTGCTCAGCCCATATGCTTTGGGTTGGGGAAAGGACAAGGCAACTGGATGGTGCCCATGTTGAGTTTCTTAGAGGAGTTGCCAATCCCTTGGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAAACTCATTGAGATCTTGAATCCCCAAAACAAACCAGGGAGAATAACCGTGATCACAAGGATGGGAGCTGAAAATATGAGAGTGAAGCTTCCACATCTAATCAGGGCAGTGCGCAGAGCGGGGCAAATTGTGACATGGGTCAGTGATCCTATGCATGGAAACACCATAAAGGCTCCATGTGGTCTTAAAACTCGCCCCTTTGATGCCATCAGGGCTGAAGTGAGAGCATTCTTCGATGTGCATGAACAAGAAGGAAGCTACCCAGGTGGAGTTCATCTTGAGATGACTGGTCAAAATGTGACAGAGTGCATTGGTGGGTCAAGGACGGTCACATTTGATGACCTGAGCTCACGTTACCACACACACTGTGACCCAAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATATCTGAAAGGCTAAGAAAGAGTAGGATGAGATCACAGCAGCCTGTTGCCTCTGTAGGACTGTGA 1623 0.4911 MAAISSTANSLISSSKSSISPTHSFVHSTKLNQSSFPGPGPRPKPSILAVHAAEPAKNPVVSDKPPKAQPAVVPGRNAGPDQGKWIIDSWKSKKALQLPEYPSQEELESVLKTLEDFPPIVFAGEARTLEEHLGEAALGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQMPIIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDSFDEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTVHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGRYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSYPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIISERLRKSRMRSQQPVASVGL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01476 540 MobiDBLite consensus disorder prediction 1 36 - -
Rops9g01476 540 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 85 527 IPR002480 GO:0003849|GO:0009073
Rops9g01476 540 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 45 534 IPR002480 GO:0003849|GO:0009073
Rops9g01476 540 SUPERFAMILY Aldolase 82 525 - -
Rops9g01476 540 Pfam Class-II DAHP synthetase family 85 521 IPR002480 GO:0003849|GO:0009073
Rops9g01476 540 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 274 526 - -
Rops9g01476 540 MobiDBLite consensus disorder prediction 1 78 - -
Rops9g01476 540 Gene3D Aldolase class I 118 282 IPR013785 -
Rops9g01476 540 Gene3D Aldolase class I 283 526 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01476 Rops-Chr9 24598751 24603509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01476 K01626 - gmx:100797019 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01476 9 24598751 24603509 Rops9g01476 9 24598751 24603509 ECH
Rops9g01476 9 24598751 24603509 Rops10g01773 10 32989145 32995228 PCT