Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01773 ATGGCTGTGACCGCTTCCAACTCTCTCATTCCCACCAAATCCTTACTCTCTTCACATTCCCTCCTTCCTTCCGCCAAACTCAACCAATGTTCATTCTCCGACAGGCCCAGGCCCAGGCCCAAGTCCAAGCCCATCGAAGCCGTTCACGCCGCCGACAAGCAGCAAGCCACAGCCACCCCCACCCCCACCCCCACCCGTACCCGTGAGGTGAAATGGAGCGTGGATAGCTGGAAATCGAAGAAGGCCATTCAACTCCCGGAATACCCGAACCAAGAGAACCTGAAGTCGGTGCTGAAGACTCTGGAAGCCTTCCCTCCAATCGTCTTCGCCGGAGAAGCTAGAAACCTCGAGGAGCGTTTAGGAGAGGCTGCCATGGGGAACGCTTTTCTTCTTCAAGGTGGAGACTGTGCGGAGAGCTTCAAGGAGTTTCATGCCACCAACATTCGTGACACTTTCAGAATCCTTCTCCAGATGGGTGTTGTCATGATGTTTGGAAGCCAAATGCCTGTCATCAAGGTGGGAAGAATGGCTGGTCAATTTGCGAAACCGAGATCCGAAGCGTTTGAGGAGAAAAACGGTGTGAAGTTGCCAAGTTACAGGGGAGATAATGTGAATGGAGATGCTTTTGAAGAGAAGACAAGAATTCCTGATCCTGAAAGGATGATTAGAGCGTATTGTCAATCTGCTGCCACTCTCAATCTTCTCAGAGCTTTTGCCACTGGAGGGTATGCTGCTATGCAAAGGGTCACCCAATGGAATTTGGACTTCACGCAGCACAATGAACAGGGAGACAGGTACCTAGAGCTTGCTCACCGAGTTGATGAGGCACTTGGATTCATGGCTGCTGCTGGTCTCACAGTGGACCATCCTATAATGAAAACAACAGAGTTTTGGACTTCACATGAATGTTTGTTATTGCCATATGAGCAATCACTCACTAGGTTGGATTCAACTTCTGGTCTCTATTATGACTGCTCTGCCCATATGCTTTGGGTTGGGGAACGCACCAGGCAACTGGATGGTGCCCATGTTGAGTTCCTAAGAGGAGTTGCTAATCCCCTCGGAATTAAGGCAAGTGATAAGATGGATCCAAATGAGCTTGTAAGACTCATTGAGATATTGAATCCCCAAAACAAACCAGGGAGAATAACTGTGATCACGAGGATGGGAGCAGAGAATATGAGGGTTAAGCTTCCAAATCTAATCAGGGCAGTACGTAGAGCGGGGCAAATTGTGACATGGGTCAGTGATCCTATGCATGGAAACACTATTAAGGCTCCGTGTGGACTCAAAACTCGCCCCTTCGATGCCATCATGGCCGAGGTGAGAGCATTCTTCGACGTGCACGAACAAGAAGGAAGCCACCCAGGTGGGGTTCATCTAGAGATGACTGGTCAGAATGTAACTGAGTGCATTGGTGGGTCGAGGACGGTCACATTTGACGATCTAAGCTCACGTTACCATACACACTGTGACCCTAGACTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATTGCTGAACGCCTCAGAAAGAGGAGGCTCACATCGGAGCACCCTCTTTCCTCTCTAGGACTGTAA 1584 0.4956 MAVTASNSLIPTKSLLSSHSLLPSAKLNQCSFSDRPRPRPKSKPIEAVHAADKQQATATPTPTPTRTREVKWSVDSWKSKKAIQLPEYPNQENLKSVLKTLEAFPPIVFAGEARNLEERLGEAAMGNAFLLQGGDCAESFKEFHATNIRDTFRILLQMGVVMMFGSQMPVIKVGRMAGQFAKPRSEAFEEKNGVKLPSYRGDNVNGDAFEEKTRIPDPERMIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHNEQGDRYLELAHRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKASDKMDPNELVRLIEILNPQNKPGRITVITRMGAENMRVKLPNLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIMAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRLTSEHPLSSLGL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01773 527 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 72 515 IPR002480 GO:0003849|GO:0009073
Rops10g01773 527 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 41 520 IPR002480 GO:0003849|GO:0009073
Rops10g01773 527 MobiDBLite consensus disorder prediction 29 67 - -
Rops10g01773 527 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 261 513 - -
Rops10g01773 527 SUPERFAMILY Aldolase 61 512 - -
Rops10g01773 527 Gene3D Aldolase class I 105 270 IPR013785 -
Rops10g01773 527 Gene3D Aldolase class I 271 513 IPR013785 -
Rops10g01773 527 Pfam Class-II DAHP synthetase family 72 508 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01773 Rops-Chr10 32989145 32995228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01773 K01626 - gmx:100797019 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01773 10 32989145 32995228 Rops10g01773 10 32989145 32995228 ECH
Rops9g01476 9 24598751 24603509 Rops10g01773 10 32989145 32995228 PCT