LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g01416	ATGTTGCAAAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCCAGCCACATTAGGACAAAGCAGTCAAAATGGCTGGATCAAAGCCTCCTTGATATGGAGGAGAAGGTGGCTGATACACTTCAAATCCTTTGTGATGATGGAGACTCATTTGCCAAGAGGGCAGAAACCTATTACAGGAGGAGGCCAGAGATTGTAGATTTTGTGGAAGAAGCCTTTAAAGAATACAAAGCCTTAGCAGAGAGATATGATCATTTATCCAAGGAACTCCAAAGTGCCAACCGCACTATTGCAAGTGTCTTCCCAGACCAAGTTCCATGCCAAATTGATGATGATGAAGAAAGTGATAGAGAAACACATTCATCATCATCTCCAGACCCCAAAAATCAAACACAAAAATCATTCATTCCTAAGATCCCAAAGAAGGAATTTAGAAGCCCCTCCATGTTGCTCTCTAGGAAGGGCCCACCTAAGAGGATTACTAACTCTGCAAAATTTGTTCCAACAACTCTAAGGTCAGGTCTTACCAAGGAGGCAGCAATAGCTGAAATTGACAAGCTTCAGAAAGAAATTTTGGCACTGCAGACTGAGAAAGAGTTTGTGAGGAGTGTGTATGAACGTGCCTATGAAAAGTACTGGGAAATTGAAGACCAGATCACAGAAATGCAAAAGAGAGTTTGCAGCTTGCAAGATGATTTTGGTGTTGGTACTGTCATAGAAGATAATGATGCTAGAGCTTTAATGGCAGCCACAGCTCTAAAATCATGCCAAGACACCCTGGATAAGTTGCAAGAGATACAAGCAAAATCATCTATAGAAGCTAAAGTGGAGTATGAAAGGGTTAAGAAAGCTCATGATATGTTTGAAACACTTAGAGACCAATTTGTTTCTAAATATGTGAGCCAAGAAAACCAAGATAATGAGGACAAATCTGAGAGCATGAGAGCAGAACAAAAAAGCATAGATGAAGAGATGACTAATTTGGAGAAAGAGGAGCATGATGTTGTGCTATTGCGAGAGAAGATTAAAGAAAAGTTGGAACAAGATTCGGGTAACTCCCTCACTGTGACTGAAATGGCTGAGTGCATTGATGAGCTTGTAAATAAGGTTGTTACCTTGGAAACTGCTGTGTCTTCTCAGAATGGTTTGGTAAAGACATTGAGATCACAAACAGATGAACTTCAGACAAATATGAGAAAGTTGGAAGAGGACAAGGAAATGCTCATTGAAGGTTCAGAAGTTAACAACAAGAAGCTTAAAGAATTGGAGGAGGAGTTATTGAGAGTTAAACTTCTCAACAAAAGTGTCAGAACACAAGACAACAGCCTCCGAAGTCACTTCACTGAAGCTAGCTGTAATCTTGAGCACCTTTCTGGAAAGTTGAACAACATGAAACCAGATGTAGAGGATGAGAACATGGTACTTTACAAGAAGAAGAAAAGTTCTCCTGAAAATCATGGTGATAAAAATTCTATTGATAACTCAGAAGTCATGAATGATGTCAAGACAATAAAGGAAGATAATGGTAAAAATGTGGATGACAACAAGTCCGTTTTGAGCCAAGATACTAAATTTATGATTGAAGGGATTCAAAAGCCGGTACAAGAGGATAAGGATGATTTGTCTGAAACAGTGAGCAATCATGACAATGAATCACAGGATTTGGACACTAGTGAGGAGGATCAACCTAACTGGAGGCAGATGTTTGTCAATGGACTAGATGACAGAGAAAAGATTCTGTTGGAGGAGTACACATCAGTTTTAAGGAACTATAAAGAAGTAAGGATGAAGCTCAATGATGTGGAAAAGAAAAATCGGGACAACATTTTTGAGTTGGCACTTCAGCTAAGGGAAGTGAAGAATGCTCTTGCCTCAAAGGATAAAGAGATACACGTTTTACATGAGAAGCTGAACAGTCCATACTCAAATCCTGAAGAAAGTCCTTACACGACTACCACAGAATATAAATATACACCAAATGAAGCGCTTCTTAGAAAAGAAGGTAAAGGAGCAAATGTGCAGGATTCACCATCAAATGCAGACAGAACTCCTTTTGCAGAACAACAAGTTGAAACTGATAGCACAGAAAAAATTGATCTATCATCTGTAAACACAACCCTAGAGAAGCTGATGGCACACCAAGATAAGCGCCAAGACCTTTCAAACTTGGAAAAGAAATTCCGTTCAGACATTGATGATCTGCTAGAGGAGAATCTAGAGTTTTGGTTGAGGTTTAGCACCTCAGTTCATCAGATCCAGAAGTTCCAAAACTCTATCCAAGACTTAAAAGCAGAGCTGAAGACAATAAAGGAAAAGAATAAATCTAATAAATCTGAAGGGAATTCACATTCTAGACATCATCAGTCTATGCAATCTCAACTTAGGCCAATATTCAGACACTTGAGAGAGATAAGAACTGAGTTATCACTGTGGATTGAACATAATGCAGTGTTGCAGGATGAATTACAAGGTAGGTATTCATCCTTGTGCAACATCCAAGATGAAATTTCAAGAGCAGGGAACTCAGAATCTGGTGCTGACACGGCAGAACTAATAACTAGGTATCAAGCTGCAAAGTTTCAAGGTGAGATTCTCAACATGAAACAAGAAAACAGCAAGGTTGCAAGTGAACTTCAAGCTGGTCTCAGCCTTGTGAAGGGTATGAAAGATGATGTTGAGAAGACACTAGATGAGCTTGATCAAGCTATTGGGATCAATAGTATTCATAGCAACTCGAAACACTCCCCAAGTCGTGCTCGAATACCCTTGAGGTCTTTCTTGTTTGGTGTCAAGTTAAAGAAGCAAAAGCATCATCAATCACTATTTGCATGTGTCAATCCAGCACTCAACAAACAATTCAGTGTCAATGAACCTCCGGCACTCCCTTATTAA	2892	0.3963	MLQRAASNAYSWWWASHIRTKQSKWLDQSLLDMEEKVADTLQILCDDGDSFAKRAETYYRRRPEIVDFVEEAFKEYKALAERYDHLSKELQSANRTIASVFPDQVPCQIDDDEESDRETHSSSSPDPKNQTQKSFIPKIPKKEFRSPSMLLSRKGPPKRITNSAKFVPTTLRSGLTKEAAIAEIDKLQKEILALQTEKEFVRSVYERAYEKYWEIEDQITEMQKRVCSLQDDFGVGTVIEDNDARALMAATALKSCQDTLDKLQEIQAKSSIEAKVEYERVKKAHDMFETLRDQFVSKYVSQENQDNEDKSESMRAEQKSIDEEMTNLEKEEHDVVLLREKIKEKLEQDSGNSLTVTEMAECIDELVNKVVTLETAVSSQNGLVKTLRSQTDELQTNMRKLEEDKEMLIEGSEVNNKKLKELEEELLRVKLLNKSVRTQDNSLRSHFTEASCNLEHLSGKLNNMKPDVEDENMVLYKKKKSSPENHGDKNSIDNSEVMNDVKTIKEDNGKNVDDNKSVLSQDTKFMIEGIQKPVQEDKDDLSETVSNHDNESQDLDTSEEDQPNWRQMFVNGLDDREKILLEEYTSVLRNYKEVRMKLNDVEKKNRDNIFELALQLREVKNALASKDKEIHVLHEKLNSPYSNPEESPYTTTTEYKYTPNEALLRKEGKGANVQDSPSNADRTPFAEQQVETDSTEKIDLSSVNTTLEKLMAHQDKRQDLSNLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKTIKEKNKSNKSEGNSHSRHHQSMQSQLRPIFRHLREIRTELSLWIEHNAVLQDELQGRYSSLCNIQDEISRAGNSESGADTAELITRYQAAKFQGEILNMKQENSKVASELQAGLSLVKGMKDDVEKTLDELDQAIGINSIHSNSKHSPSRARIPLRSFLFGVKLKKQKHHQSLFACVNPALNKQFSVNEPPALPY*	964

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g01416	963	Coils	Coil	752	779	-	-
	Rops9g01416	963	Coils	Coil	717	737	-	-
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	672	695	-	-
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	532	553	-	-
	Rops9g01416	963	Coils	Coil	419	439	-	-
	Rops9g01416	963	PANTHER	PROTEIN NETWORKED 2D	1	955	-	-
	Rops9g01416	963	Coils	Coil	311	348	-	-
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	532	561	-	-
	Rops9g01416	963	Coils	Coil	177	225	-	-
	Rops9g01416	963	Coils	Coil	384	411	-	-
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	668	695	-	-
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	771	792	-	-
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	107	138	-	-
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	477	513	-	-
	Rops9g01416	963	ProSiteProfiles	Networked (NET) actin-binding (NAB) domain profile.	10	90	IPR011684	GO:0003779
	Rops9g01416	963	MobiDBLite	consensus disorder prediction	477	517	-	-
	Rops9g01416	963	Coils	Coil	69	96	-	-
	Rops9g01416	963	Pfam	KIP1-like protein	11	84	IPR011684	GO:0003779

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g01416	Rops-Chr9	23298696	23302862	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g01416	-		-	gmx:100784970	1382.85

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops9g01416	9	23298696	23302862	Rops9g01416	9	23298696	23302862	ECH
	Rops9g01416	9	23298696	23302862	Rops10g01721	10	32166854	32170607	PCT