Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01721 ATGTTGCAAAGGGCAGCAAGAAATGCACATTCATGGTGGTGGGCAAGCCACGTCAGGACAAAACAATCCAAATGGCTGGAACAAAGCCTCCAAGATATGGAGGAGAAGGTGGCTGAGGCCCTCCAAATCATTCATGATAATGGCGACTCATTTGCCCAGAGAGCAGAAATGTTCTACAGGAAGAGGTTAGAGCTGGTAGGTTTTGTGGAAGAAGCTTTTCGAGCATATAGAGCATTAGCAGAGAGATATGATCATCTTTCAAAGGAGCTCCAAAGTGCTAACCGCACCATTGCCACTGTCTTCCCAGAACAAGTCCAATATAGAATGGATGAAGATTATGATGATGAAGAAAGTGTCCGTGGAACAAATTCATCATGTCCAGACCCCAACAATCAAACAGAAAAACCAGGCATCCCAGAAGTTCCTAATATTCCAAAGAAAGATTTTAGAAATCCATCCATGTTGCTCTCTAGGAAGGGACCACTTAGGAGGAGTGTAAGCACTGCAAAATCTGTTCCAACAACTCAAAGTTCGGGGCTGAGTAAGGTTGAAGCGCTAGCAGAAATAGACAAGCTTCAGAAAGAAATGTTGGCACTGCAGACTGAGAAAGAGTTTGTAAGAAGCTTGTATGAACATTCCTATGAAAAGTACTGGGAAATTGAAGACCAGATTACAGGAATGCAAAAAAGAGTTTACAGCTTGCAAGATGAGTTTGGCACTAGCACAGTCATAGAAGATAATGATGCAAGAGTTTTGATGGCAACCACAGCTTTGAAATCATGCAAAGAGACCCTAGCTAAGTTGCAAGACGTGCAAGCACAATCATCTGAAGAAGCTAAAGCAGCATATGAAAGGGTTAAGGAAGCTCATGACAAGTTTGAATCCCTTAGAGACCAATTCATTTCTAAACATACAAATCAGGAAGACCAAGTAACAGAACCAGAAAGCAAAGAAGAAGAGATAGCTAGCTTGGAAGAAGAGATGCATGAGCAAGATGTGGGGTTGTTGCAAGAGAGGATTAAGGAACAGCTTGAGGAAGATTCAGGTAACTCCCTCACAATGACAGAAATTGCAGAGAGGATTGATGAGCTCGTAAATAAGGTCGTTACCTTGGAAACCAAGGTCTCTTCTCAGAATGGCTTGGTAAAGAGACTGAGATCAGAAACAGATGAACTTCAGAAAAATATACGGAACTTGGAAGAGGAAAAGGAAATGCTGATAGAAGATTCAGAAAAAACCAATGAGAAGCTGAGAGAATTGGAGGAGGAGTTGAGGAGAGTCAAAATTCTTAACCAAAGTGTCAAAAGGCAAGACAACAGCCTCCAAACACACTTTACTGAAGCTAATTGTAAACTTGAGCATCTTTCAGGAAGATTGAATAATGTGAAGCTAGATGAGGATGGGGAGAACATTGTACTTTACAAGAAGAGAAGTGTTCCAGATGGACAACTGAGAGAGGAGTCTGAAGAATCTGGCAATAACTTAGCAATCATGAATGATGCCAAGACAACAAAGGAGGAGAAAGAAGATTATGCTGAAAATCTAGGTGATGTCAAAAATGAAGATGACAAGTCCAATGTGAAGGAAAATATTGATTTTAAAACTGAAGAGATAGAACCAATAGAGCAAGATAAAGATGATTTGTCTGAGACAATGAACAATCTTGACAATGAATCACATGATCAAGGGACTGGTGAGGAAGAAGATAAACCTAACTGGAGGCAGATGTTTGTAAATGGAACAGACGACAGAGAAAAGATTCTGTTGGAGGAGTACACATCAGTTTTAAAGGACTATAAGGACGTAAAGGTCAAGCTCAATGATGTGGAGAAGAAAAATAGGGACAGCGTTTTTGAGTTATCACTTCAGGTAAGGGAATTGAAGGATGTTGTTGCCACTAAGGATGAAGAGATAAACTGTTTACATCAGAAGCTGACCTGTTCAGAAACAAATCCTGATGAAAGTCCTTGTACCCCTCTCACAGAATATAAATATACCCCACAAGAAGCGATTCTTCAACCCACAGCTCAAGGAGCTAACATGCAGAGCCCTGAAATTCCATCTTCAAACACATATACAAGTGTAGTAGAAAACACAGTAAATATTGGCATGTCAACTAGAAACATGAGGTTAGTGAAGCTGAGAGCAAACCAGGTTGATAAGGACCATTCTCTTTCAACCTTGGAAAAGAAATTTCGTTCAGAAATTGATGATTTGTTGGAGGAGAACTTAGAGTTCTGGTTGAGATTTAGCACCTCAGTTCATCAAATTCAAAAGTTCCAAAATTCCATACAGGACTTAAAAGCTGAGCTAAGGAAAATAAAGGAAAACAGTACGTCTGAAGGGAACTCAAATTCTATACAATCAGAAATGAAGCCAATATTTAGCCACTTGAGAGAAATAAGAACCGAGTTATCACTGTGGTTGGAACATAATGAAGTATTGCAAGACGAGTTACAAGGTAGGCATCCATCATTGTGCAGCTTACAAGATGAAATAGCAAGAGCAGCCCATCCAGATTCTATGGCAAAAAAAGCAGAACTAAGTGGGTATCAGGCTGCAAAGTTTCAAGGTGAGGTTCTCAACATGAAACAAGAGAACAACAGAGTTTCCAGTGAACTGCAAGCAGGTCTTAGTTTTGTAAAGGGACTTAAAAATGAAGTTGAGAAAATGCTAAAAGAACTTAGTCAAGCAATTGGAGTTAATAATCACCATGGTTACGACCATGACCATGTGAAACACTCTTCAAGTCGTGGTAAAATACCCTTGAAGTCTTTTTTGTTTGGTATCAAGTTAAAGAAGCAAAAACAACCGGTATGTGCCAGTCCAGCACTGCAGAAACAACACAGTGATTTAGCATCCGCTAACGATGCCCCAACATAG 2883 0.4006 MLQRAARNAHSWWWASHVRTKQSKWLEQSLQDMEEKVAEALQIIHDNGDSFAQRAEMFYRKRLELVGFVEEAFRAYRALAERYDHLSKELQSANRTIATVFPEQVQYRMDEDYDDEESVRGTNSSCPDPNNQTEKPGIPEVPNIPKKDFRNPSMLLSRKGPLRRSVSTAKSVPTTQSSGLSKVEALAEIDKLQKEMLALQTEKEFVRSLYEHSYEKYWEIEDQITGMQKRVYSLQDEFGTSTVIEDNDARVLMATTALKSCKETLAKLQDVQAQSSEEAKAAYERVKEAHDKFESLRDQFISKHTNQEDQVTEPESKEEEIASLEEEMHEQDVGLLQERIKEQLEEDSGNSLTMTEIAERIDELVNKVVTLETKVSSQNGLVKRLRSETDELQKNIRNLEEEKEMLIEDSEKTNEKLRELEEELRRVKILNQSVKRQDNSLQTHFTEANCKLEHLSGRLNNVKLDEDGENIVLYKKRSVPDGQLREESEESGNNLAIMNDAKTTKEEKEDYAENLGDVKNEDDKSNVKENIDFKTEEIEPIEQDKDDLSETMNNLDNESHDQGTGEEEDKPNWRQMFVNGTDDREKILLEEYTSVLKDYKDVKVKLNDVEKKNRDSVFELSLQVRELKDVVATKDEEINCLHQKLTCSETNPDESPCTPLTEYKYTPQEAILQPTAQGANMQSPEIPSSNTYTSVVENTVNIGMSTRNMRLVKLRANQVDKDHSLSTLEKKFRSEIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELRKIKENSTSEGNSNSIQSEMKPIFSHLREIRTELSLWLEHNEVLQDELQGRHPSLCSLQDEIARAAHPDSMAKKAELSGYQAAKFQGEVLNMKQENNRVSSELQAGLSFVKGLKNEVEKMLKELSQAIGVNNHHGYDHDHVKHSSSRGKIPLKSFLFGIKLKKQKQPVCASPALQKQHSDLASANDAPT* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01721 960 Coils Coil 881 901 - -
Rops10g01721 960 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Rops10g01721 960 Coils Coil 757 777 - -
Rops10g01721 960 Coils Coil 182 209 - -
Rops10g01721 960 Coils Coil 279 299 - -
Rops10g01721 960 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Rops10g01721 960 Coils Coil 354 374 - -
Rops10g01721 960 MobiDBLite consensus disorder prediction 941 960 - -
Rops10g01721 960 MobiDBLite consensus disorder prediction 537 570 - -
Rops10g01721 960 Coils Coil 501 521 - -
Rops10g01721 960 MobiDBLite consensus disorder prediction 112 180 - -
Rops10g01721 960 Coils Coil 382 437 - -
Rops10g01721 960 Coils Coil 538 558 - -
Rops10g01721 960 PANTHER PROTEIN NETWORKED 2D 1 955 - -
Rops10g01721 960 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01721 Rops-Chr10 32166854 32170607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01721 - - gmx:100805236 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01721 10 32166854 32170607 Rops10g01721 10 32166854 32170607 ECH
Rops9g01416 9 23298696 23302862 Rops10g01721 10 32166854 32170607 PCT