Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01346 ATGCCAATATCGGTATCCTGGAAGTTCCCTAGTTTCATTCTTATTCTTTTTACTTTCTTATCTTGCTCTTTCTCTAGCATATTCACCATAACCAACAATTGCCCTTATACTATATGGCCTGGAACACTCTCCGGTTCAGGCACACCGCCACTTTCGACCACCGGATTCCGGCTTGACTCGGGCCAAATGGCCAAACTTACAAGTGTTCCAGGATGGTCAGGGAGGATATGGGCTAGGACTGGTTGCACTTTTGATACAACAGGAATTGGCAAATGCCAAACTGGTGACTGTGGTGGAAGGCTTGAATGTGATGGAAATGGTGCTGCTCCTCCTACCTCTTTGTTTGAGATAACACTCGGTCAAGGCAATGATCAAGACTACTATGATATTAGTATGGTAGATGGCTACAATCTGCCACTGCTTGTTAATCCCAGAGGAGTATATGGTAGTAGTGCATGTAATGCCACAGGGTGTGTCACTGATATCAATAGAGGTTGTCCAAAAGAGCTTCAAGTAGTTGGTGGGGATGGATACCAAGGTGGTGTGGTTGGATGTAAGAGTGCCTGTGAGGCATTTGGATCGGATCAGTATTGCTGCAGTGGACAATTTGCCAACCCAACAACATGCCAGCCCTCCTATTATTCCTCCATTTTCAAGCAGGCTTGTCCAAAAGCTTATAGTTATGCATTTGATGATGGCACCAGCACTTTCACTTGCAAAGCTTATGAATATGACATTGTTTTCTGTCCCAGCAGCAATAGGATTAAAAAACCAAATGATGCAATTTCTCCACCACCACCATCAATTACATGGCCTCATGAGAAGTTTCAGCAAGCAAATTCTTCTTCAAATATTATCTTGCCCTTTCCCATGAGAATCTTTCTCTTGGTTGCCACACTCTATGTATTTGTAACAAAGACATGGCCACTGATATGA 936 0.4348 MPISVSWKFPSFILILFTFLSCSFSSIFTITNNCPYTIWPGTLSGSGTPPLSTTGFRLDSGQMAKLTSVPGWSGRIWARTGCTFDTTGIGKCQTGDCGGRLECDGNGAAPPTSLFEITLGQGNDQDYYDISMVDGYNLPLLVNPRGVYGSSACNATGCVTDINRGCPKELQVVGGDGYQGGVVGCKSACEAFGSDQYCCSGQFANPTTCQPSYYSSIFKQACPKAYSYAFDDGTSTFTCKAYEYDIVFCPSSNRIKKPNDAISPPPPSITWPHEKFQQANSSSNIILPFPMRIFLLVATLYVFVTKTWPLI* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01346 311 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Rops9g01346 311 SUPERFAMILY Osmotin, thaumatin-like protein 27 251 IPR037176 -
Rops9g01346 311 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Rops9g01346 311 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Rops9g01346 311 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Rops9g01346 311 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Rops9g01346 311 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Rops9g01346 311 PANTHER OS03G0233200 PROTEIN 15 250 IPR001938 -
Rops9g01346 311 FunFam THAUMATIN-LIKE PROTEIN 1 26 250 - -
Rops9g01346 311 Pfam Thaumatin family 32 250 IPR001938 -
Rops9g01346 311 CDD TLP-PA 27 249 - -
Rops9g01346 311 PIRSF PR5 1 288 IPR001938 -
Rops9g01346 311 Gene3D Thaumatin 27 250 IPR037176 -
Rops9g01346 311 SMART tha2 28 250 IPR001938 -
Rops9g01346 311 ProSiteProfiles Thaumatin family profile. 25 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01346 Rops-Chr9 22186507 22188171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01346 12 251 Receptor kinase-like Gene Family AT5G38280 44.215 1.76e-68 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01346 - - gmx:100805642 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01346 9 22186507 22188171 Rops10g02212 10 39670627 39671873 PCT