Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00934 ATGGGAATGAGTCCTCGATCTAATACAATAGCATTTGATGAAGACGTGCCTCTTTTTGCTTTAACTTTGATTAATTCAGCCATAGAGTTGGGAGGGCCCTCGTTTCACCAACATCCTAGATTGCTGAGATTAATTCAGGATGAATTATTCTGCAATCTTATGCAATTTGGTTTGTCAATGAGTCCCCTTGTACTTTCAATGGTATGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTAGAGAGCTCAAATTACAACTGGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAATATGGGGCTTCATATCAGCAACAGGAAGTTGCCATGGAGGCCCTTATTGATTTCTGCAGGCAAAAAACATTCATGGTGGAGATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGACATTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAGTCCATTGTCTTCCATGCATATTCTTGCTTTGGAGGGTCTTATTGCTGTCATGCAAGGAATGGCTGAAAGGATAGGCAATGTATCTTTAAGTTCAAAACATTCTCCAGCGAATCTTGAAGAGTATACTCCATTCTGGCAGGAAAAGTGTGGAAATTTCGGTGATCCAAATGATTGGGTTCCTTTTGTTTGCCGAAGAAAGTACTTCAAGAAAAAGTTGATGATTGGGGCTGATCATTTTAATCGTGATAGTAAGAAAGGTCTTCAATTTCTCCAAGGAATACATCTTTTGCCTGATAAACTTGATCCCCAAAGTGTTGCCTGCCTTTTCAGATACACTGCTGGGTTGGATAAGAATCTTATTGGCGATTTCCTAGGAAACCATGATGACTTCTGTGTTCAGGTTCTTCATGAATTTGCTAGAACATTTGATTTCAAAGATACGACATTAGACACAGCCCTGCGGCTATTTTTGGAGACTTTCAGACTTCCTGGAGAATCACAGAAGATACAGAGGGTACTTGAAGCTTTCTCAGAGAGATATTATGAGCAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTCTTGTTATCATACTCAATCATAATGCTTAATACAGATCAGCACAACATGCAGGTCAAAAAGAAGATGACAGAGGAGGATTTTATCCGAAATAATAGGCGAATAAATGGTGGTAATGATCTACCTCGAGAATTCCTGTCAGACCTGTACCATTCAATTTGTAAGAATGAGATCCAAACAACACCTGAGCAAGGCTCTGGTTTTCCTGAGATGACCCCAAGTCGGTGGATTTATCTCATGCACAAGTCAAAAGAAACTGCTCCCTTCATTGTTTCTGATTGCAGAGCATACCTTGATTATGATATGTTTGCTCTATTATCTGGTCCAACAATTGCTGCCATTTCTGTGGTATTTGATAATGCTGAAAGTGAAGAGGTATACCAAACATGTATGGATGGATTCTTAGCTGTTGCGAAGATATCAGCTTACTATCATCTTGAAAATATACCGGATGACTTGGTTGTGTCACTTTGTAAGTTTGTTACAATTTTGGATCCATTATCTGTTGAGGAGTCAGTCCTAGCCTTTGGAGATGACACAAAAGCAAGAATGGCAACTGAGACAGTTTTTACAATTGTGAATAGGTATGGTGATCACATCCGCACAGGGTGGAGGAATATTCTTGATTGTATCTTGAAATTCCATAAGTTAGGTCTTCTTCCTGCTCGTATGGCCAGTGATGCGGCTGAAGAGTCAGAGCATTCTGCAGAAACTGGGCATGGGAAGCGTAATGCTAACTCTTTATCTTCATCTCATTTTCCATCTGTCAGTACTCCTAAGAGATCCTCAGGATTGATGAGCAGGTTTAGTCAACTCTTATATCTTGGCACTGAAGAGTCAAGATCAGTACCCACTGAAGAACAACTTGCTGCTCAGCAGTGTGCCCTTCAAACAATTCAGAAGTGTCACATTGACAGCATATTCACAGAAAGTAAATTTTTGCAAGCTGAATCTCTATTGCATCTTGCAAAAGCACTCATTAGTGCTGGAGTACGACCTAAGAAAGGGAACAGCACATTTGAGGATGAAGATACTTCAATTTTCTGCCTGGAGTTACTGGTAGCAATCACTCTGAATAACAGGGATAGAATTGAACTTCTTTGGAAGAGTGTTTATGAACATATTTTCAATGTTGTGCAGTCAACTGTGATGCCTTGTGCACTGGTGGAGAAGGCTGTTTTTGGACTCCTAAGGATTTGCCATCGCTTACTTCCCTACAAAGAGAACATTACCGATGAACTATTGAGGTCCCTGCAACTTGTCCTGAAGCTTGATGCACGTGTTGCTGATGAATACTATGAGCAGATCACACAGGAAGTTAATCACCTTGTGAAGGCAAATGCTTCTCATATTAGATCTCAGTTAGGATGGCGGACGATTACATCACTGCTTTCCATCACTGCCAGACACCTGGAAGCATCTGAGGCTGGATTTGATGCATTGTTGTTCATTATGTCAGATGGAGCCCACCTGCTCCCAGCTAATTATGTTCTCTGCGTAGAAGCTGCGAGGCAGTTTGCTGAATCTCGTGTTGGACAGGTAGAGCGGTCTGTTGTGGCACTTGATCTTATGGCAGGGTCTATCAATTGTTTAGAGAAGTGGACTAATGATGCTAAGCAAACTATGAAAGAAGAGGAAGTGGCAAAGTTGTTGCAGGATATTGGGGACATGTGGTTGAGGCTTGTACAGGGACTAAGAAAACTATGTTTGGACCAGAGAGAGGCGGTTAGAAACCATGCATTGTTTTCTTTGCAGAAGTGCTTGACAGGAGGAGTTGGGGTTCATCTCCCACATGGCTTGTGGTTGCAATGTTTTGATCAAGTGATCTTCACTTTGCTTGATGACCTGCTTGAAATTTCTCAGACACACTCTCAAAAGGAATACAAGAACATGGAAGTAACACTTATTCTTGCGTTGAAGCTCTTGTCTAAGGTTTTCCTCCTGTTACTCCAAGACCTATCACAATTGACAGACTTCAGCAAATTATGGTTGGGCGTGCTAAGTCGTTTCGAAATATATATGACGGTGAAAGTTAGGGGAAGGAGAAGTGAGAAGCTTCAAGAGCTTGTGCCTGAGCTTCTCAAGAACACTTTGCTTGTCATGAAAGCAGGCCGTGTACTAGAGTGGAGCAGTAGTGTAGGTGAAAATAGTTTCTGGGAGCTGACATGGCTGCATATAAATAATATCGCTCCCTCATTGCAATCTGAGGTTTTCCCTGAGCAAGATTCAGAGCATTTACAGCAAGAACAGCCTGAACAAGTTGGAGGTTTGGGACCTGATGAGAAGGTTTCTGTGCCTTCTAATGAAACAACAGGCCAAGATGGTCCTGGCATTGGTTAA 3402 0.4136 MGMSPRSNTIAFDEDVPLFALTLINSAIELGGPSFHQHPRLLRLIQDELFCNLMQFGLSMSPLVLSMVCSIVLNLYHHLRRELKLQLEAFFSCVILRLAQSKYGASYQQQEVAMEALIDFCRQKTFMVEMYANFDCDITCSNVFEDIANLLSKSAFPVNSPLSSMHILALEGLIAVMQGMAERIGNVSLSSKHSPANLEEYTPFWQEKCGNFGDPNDWVPFVCRRKYFKKKLMIGADHFNRDSKKGLQFLQGIHLLPDKLDPQSVACLFRYTAGLDKNLIGDFLGNHDDFCVQVLHEFARTFDFKDTTLDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALLLSYSIIMLNTDQHNMQVKKKMTEEDFIRNNRRINGGNDLPREFLSDLYHSICKNEIQTTPEQGSGFPEMTPSRWIYLMHKSKETAPFIVSDCRAYLDYDMFALLSGPTIAAISVVFDNAESEEVYQTCMDGFLAVAKISAYYHLENIPDDLVVSLCKFVTILDPLSVEESVLAFGDDTKARMATETVFTIVNRYGDHIRTGWRNILDCILKFHKLGLLPARMASDAAEESEHSAETGHGKRNANSLSSSHFPSVSTPKRSSGLMSRFSQLLYLGTEESRSVPTEEQLAAQQCALQTIQKCHIDSIFTESKFLQAESLLHLAKALISAGVRPKKGNSTFEDEDTSIFCLELLVAITLNNRDRIELLWKSVYEHIFNVVQSTVMPCALVEKAVFGLLRICHRLLPYKENITDELLRSLQLVLKLDARVADEYYEQITQEVNHLVKANASHIRSQLGWRTITSLLSITARHLEASEAGFDALLFIMSDGAHLLPANYVLCVEAARQFAESRVGQVERSVVALDLMAGSINCLEKWTNDAKQTMKEEEVAKLLQDIGDMWLRLVQGLRKLCLDQREAVRNHALFSLQKCLTGGVGVHLPHGLWLQCFDQVIFTLLDDLLEISQTHSQKEYKNMEVTLILALKLLSKVFLLLLQDLSQLTDFSKLWLGVLSRFEIYMTVKVRGRRSEKLQELVPELLKNTLLVMKAGRVLEWSSSVGENSFWELTWLHINNIAPSLQSEVFPEQDSEHLQQEQPEQVGGLGPDEKVSVPSNETTGQDGPGIG* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00934 1133 SMART sec7_5 225 412 IPR000904 GO:0005085|GO:0032012
Rops9g00934 1133 FunFam ARF guanine-nucleotide exchange factor GNOM-like 304 422 - -
Rops9g00934 1133 MobiDBLite consensus disorder prediction 582 617 - -
Rops9g00934 1133 Pfam Sec7 domain 229 412 IPR000904 GO:0005085|GO:0032012
Rops9g00934 1133 FunFam ARF guanine-nucleotide exchange factor GNOM 222 304 - -
Rops9g00934 1133 CDD Sec7 229 412 IPR000904 GO:0005085|GO:0032012
Rops9g00934 1133 SUPERFAMILY Sec7 domain 226 418 IPR035999 GO:0005085|GO:0032012
Rops9g00934 1133 ProSiteProfiles SEC7 domain profile. 221 410 IPR000904 GO:0005085|GO:0032012
Rops9g00934 1133 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1097 - -
Rops9g00934 1133 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 8 143 IPR032691 -
Rops9g00934 1133 Gene3D - 305 422 IPR023394 -
Rops9g00934 1133 SUPERFAMILY ARM repeat 16 1023 IPR016024 -
Rops9g00934 1133 MobiDBLite consensus disorder prediction 1118 1133 - -
Rops9g00934 1133 Gene3D - 222 304 - -
Rops9g00934 1133 MobiDBLite consensus disorder prediction 595 617 - -
Rops9g00934 1133 MobiDBLite consensus disorder prediction 1093 1133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00934 Rops-Chr9 15150256 15157577 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00934 K18443 - gmx:100784083 1936.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00934 9 15150256 15157577 Rops11g03556 11 67990697 67996783 PCT