Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03556 ATGCCACCAGCTCTCATTGTCAAGGAAATGGGTTCAATCAGAAGGGTGAGATTCAATGTCAGATCTAAGGGCTTTTGTTCATCTCAACATTCTTTTGGTAAATGTCAAGCCGGTCCTTTTGTCAAAATGGGACATATACTCAATGCAATAGAGGATCAATCTAAGCAATGCTATGCTGGATATCCTAACAAAACTACTATAGCATGCATGATCAATGCAGAAATTAGTGCTGTTTTGACAGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTATTTTTCAGATGATGACCAATCAGAGCACTTTCTTGTTCATTCTTTGAAGGCTTTAAGGAGGCAAATTTTCTCGTGGCAGAATAAATGGCATGCCATCGACCCTGGCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGATGAAACTGGTGCACCAATTACTGGTGCTGCTTTGTCATCTGTTTATAAGATCTTAACTCTTGATGTGATTGATCAAAACACTGTTAACGTTGGGGATACCATGCACTCGGTGATTGATGCTGTCACAAGTTGCAGATTTGAAGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTACAAGTTCTTTTGGCCTGTGTGAAAAATAAAGCATCTTTAATGCTGAGTAATCAACATATTTGCACCATAGTGAATACAAGTTTCCGTATAGTTCATCAAGCAGGAACCAAAACTGAGCTGTTGCAGCGGATAGCACGGTACACAATGCATGAACTTGTTAGGTGTATCTTCTCTCACCTTCAGGATATTGAAAACACAGAGCACGCATCAATAAGTGGGAGCACTATTTTACAACAAGAGACCAGTGGGCTAAATAATGAGCATGCTTCAGCAAGCAGACAATTGGAAAATGGGAGCCTGAATTCTGCATATGATGGTCAACAATTGTCCACAGGCATTACTTCCAGTACAGCAACTGTAGTGGCTGAAAACATAGCTATTGCTAGCAGTGGCAAGGACACTGTTCCACATGAATTACAGCTCATGACTGAACCATATGGGGTTCCCTGTATGGTGGAAATATTTCATTTTTTATGTTCTTTATTGAATGTTGTTGAGCATATGGGAATGAATCCTAGATCAAACACATTAACATTTGATGAAGACGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATTGAGGTGGGAGGGCCTTCCTTTCGCCATCACCCAAGATTGCTGAGTTTAATTCAGGACGAATTATTCCATAATCTTATGCAATTTGGTTTGTCAATGAGTCCTCTTGTACTTTCAATGGTGTGTAGCATTGTTCTCAATTTGTATCACCATCTTCGCATGGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTTTACAAAGCAAATATGGGGCTTCATATCAGCAACAAGAGGTTGTGATGGAGGCACTTGTTGATTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATTCTAACTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGACATAGTTAATTTGTTGTCCAAAAATGCATTTCCTGTAAATAATCCATTATCTTCCATTCATATTGTTGCTTTGGATGGTCTTATTGCTATAATACAAGGAATGGCTGAAAGGATAGGTAATGTATCTATCAGTTCAGAACATTCTCCTGTGAATTTTGAAGTGTATACTCCATTCTGGCTGGAAAAGTGTGAAAATTTTGGTGACCCAAATGATTGGGTTCCTTTTGTCCGCCGAAGAAAGTACTTCAAGAGAAGATTGATGATTGGGGCTGATCACTTCAATCATGATGTTAAGAAAGGTCTTGAGTTTCTCCAAGGAACTCATCTTTTGCCTGACAATCTTGATCCCCAAAGCGTTGCCTGCTTTTTCAGATACACCACTGGGTTGGATAGGAATCTCATTGGTGATTTCCTAGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTAGAACGTTTGATTTCCAGGATATGACCTTAGACACAGCCCTGCGTCTATTTCTGGAGACTTTTAGGCTGCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAGGCTTTCTCCAAGAGATATTATGAGCAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATTATAATGCTTAATACAGATCAGCACAATGTGCAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCCGGAATAATAGGCATATAAATGGTGGTAATGATCTGCCTCGAGAATTCCTGTCGGAGATTTATCATTCAATTTGTAAGAATGAAATCCGCATGACCCCTGAACCAGGCTTTGGATTTCCTGAAATGACCCCAAATTGGTGGATTTCTCTGATGCACAAGTCAAAAAAAACTGCTCTGTTCATTGTATCTGATTCCAGAGCTTACCTAGATTATGATATGTTTGTTCTATTGTCAGGCCCAACAATTGCTGCCATTTCTGTGGTATTTGATAATGCTGAAAATGAAGAGGTGTACCAAACATGTATAGATGGATTCTTGGCTGTTGCAAAGATATCGACTTACTATCGTCTTGAAAATGTGCTCGATGATCTGGTTGTGTGCCTCAGTAAGTTCTTCACCATTTTAGATCCATTATCAGTTGAGGAATCTATCCTAGCCTTTGGAGATGACACAAAAGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCTAGTAGGTATGGTGATTACATCCGTGCAGGGTGGAGGAATATGCTTGATTGCATCTTAAGATTGCACAAGATAGGCCTTCTTCCTACTCATTTGGCCAGTGATGCAGCTGACGAGTCGGAGCTTTCTACAGAGATTGGACATGGGAAGCTGAATTCAAATTCTCTATCATTAACTCATCTTAAGCCTATTGCTACTCCAAAGAGATCCTTTAGTTTATTGAGCAGGTTTAGTCAACTCTTATCTCTTGGTACTGAAGAGTCCATATCAGTACAAACTGGAGAACACCTGGTTGCTCATCAGCAAGCTGTACAAACAATTCGCAAGTGTCACATTGACAGCATCTTCACTGAGTGTAAATTTCTGCAAGCTGAATCTCTATTGCAGCTTGTGAGAGCACTCATTAATGCTGGAGCTCAATCTCAGAAAGGGAACAGAATATCTGAGGATGAAGACACTTCTGTTTTCTGTCTGGAGTTACTGGTAGCAATCACTCTGAATAACAGGGATAGAATTGGACTTCTTTGGAAGAGTGTTTATGAGCACATATCCAATATTGTTAAATCAACTGTGATGCCTTGTGCACTGGTAGAAAAGGCTGTTTTTGGACTTCTTAGGATTTGCCACCGCTTACTTCCTTACAAAGAGAACCTTACTGATGAACTTTTGAGGTCCCTGCAACTTATATTGAAGCTTGATGCACTGGTTGCAGATGCATACTATGAGAAGATTACACAGGAAGTCAATCACCTTGTGAAGGCAAATGCTTCTCATATTAGATCTCAGTCAGGGTGGCGGACAATTACATCATTGCTTTCCATCACTGCTAGACACCTGGAAGCATCTGAGGCTGGATTCGATACACTGCTGTTCATTATGTCTGATGGAACTCACTTGCTCCCTGCTAATTATATTCTCTGTATAGACGCTGCAAGGCAGTTTGCAGAGTCTCGTGTAGGAATGGTAGATCGGTCAGTAGTCGCACTAGATCTTATGGCTGGTTCTGTCAATTGTCTAGAAAAGTGGACTAGTAATGCTAAGCAAGCAGTGAAAGAAGACGAAGTAGAAAAGATGTTGCAGGATATTGGGGAAATGTGGTTGAGGTTAGTGCAGGGACTAAGGAAAGTATGTTTGGACCAAAGAGAGGAGGTTAGAAATCACGCCTTGTTATCTTTGCAGAAGTGCTTGACAAGTGCAGTTGGGACTCATCTTCCATGTGATTTGTGGTTACAGTGTTTTGATCAAGTAATCTTCACCATGCTGGATGACCTGCTTGAAATTGCTCAGGCATACTCTAAAAAGGACTCCCAGAACATAGCAGAAACACTTATTCTTGCCTTGATGCTCCTGTCTAAAGTTTTCCTCCAGTTACTGCAAGAACTATCACAATTGGAAGCCTTCTGCAAACTATGGGTGGGTGTGCTAAGCTGTATGGAAAAATATATGAAGGTGAAAGTTAGGGGAAGGAGAAGTGAGAAGCTTCAAGAGCTTGTGCCTGAGCTCCTGAAGAACACTTTGCTTGTTATGAAATCAGAGGGCATACTAGTGCAGAACAGTGACTTAGGTGAAAATAGTTTGTGGGAACTGACATGGCTACATATGAAGAATATTGCTCCATCATTGCAATCTGAGGTGTTCCCTAAGCAAGATTCCGAACAGTTGCAGCACAAACAGATTGAACTTGGAAGTTTGGAACCTGATGCAAACATTCCTGTTCCTTCACAGTGA 4473 0.4035 MPPALIVKEMGSIRRVRFNVRSKGFCSSQHSFGKCQAGPFVKMGHILNAIEDQSKQCYAGYPNKTTIACMINAEISAVLTVMRRNVRWGVHYFSDDDQSEHFLVHSLKALRRQIFSWQNKWHAIDPGLYLQPFLDVIQSDETGAPITGAALSSVYKILTLDVIDQNTVNVGDTMHSVIDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKNKASLMLSNQHICTIVNTSFRIVHQAGTKTELLQRIARYTMHELVRCIFSHLQDIENTEHASISGSTILQQETSGLNNEHASASRQLENGSLNSAYDGQQLSTGITSSTATVVAENIAIASSGKDTVPHELQLMTEPYGVPCMVEIFHFLCSLLNVVEHMGMNPRSNTLTFDEDVPLFALTLINSAIEVGGPSFRHHPRLLSLIQDELFHNLMQFGLSMSPLVLSMVCSIVLNLYHHLRMELKLQLEAFFSCVILRLLQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYSNFDCDITCSNVFEDIVNLLSKNAFPVNNPLSSIHIVALDGLIAIIQGMAERIGNVSISSEHSPVNFEVYTPFWLEKCENFGDPNDWVPFVRRRKYFKRRLMIGADHFNHDVKKGLEFLQGTHLLPDNLDPQSVACFFRYTTGLDRNLIGDFLGNHDEFCVQVLHEFARTFDFQDMTLDTALRLFLETFRLPGESQKIHRVLEAFSKRYYEQSPHILANKDAALVLSYSIIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLSEIYHSICKNEIRMTPEPGFGFPEMTPNWWISLMHKSKKTALFIVSDSRAYLDYDMFVLLSGPTIAAISVVFDNAENEEVYQTCIDGFLAVAKISTYYRLENVLDDLVVCLSKFFTILDPLSVEESILAFGDDTKARMATETVFTIASRYGDYIRAGWRNMLDCILRLHKIGLLPTHLASDAADESELSTEIGHGKLNSNSLSLTHLKPIATPKRSFSLLSRFSQLLSLGTEESISVQTGEHLVAHQQAVQTIRKCHIDSIFTECKFLQAESLLQLVRALINAGAQSQKGNRISEDEDTSVFCLELLVAITLNNRDRIGLLWKSVYEHISNIVKSTVMPCALVEKAVFGLLRICHRLLPYKENLTDELLRSLQLILKLDALVADAYYEKITQEVNHLVKANASHIRSQSGWRTITSLLSITARHLEASEAGFDTLLFIMSDGTHLLPANYILCIDAARQFAESRVGMVDRSVVALDLMAGSVNCLEKWTSNAKQAVKEDEVEKMLQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQKCLTSAVGTHLPCDLWLQCFDQVIFTMLDDLLEIAQAYSKKDSQNIAETLILALMLLSKVFLQLLQELSQLEAFCKLWVGVLSCMEKYMKVKVRGRRSEKLQELVPELLKNTLLVMKSEGILVQNSDLGENSLWELTWLHMKNIAPSLQSEVFPKQDSEQLQHKQIELGSLEPDANIPVPSQ* 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03556 1490 CDD Sec7 598 781 IPR000904 GO:0005085|GO:0032012
Rops11g03556 1490 Gene3D - 591 673 - -
Rops11g03556 1490 ProSiteProfiles SEC7 domain profile. 590 779 IPR000904 GO:0005085|GO:0032012
Rops11g03556 1490 FunFam ARF guanine-nucleotide exchange factor GNOM-like 673 791 - -
Rops11g03556 1490 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 351 512 IPR032691 -
Rops11g03556 1490 Gene3D - 674 789 IPR023394 -
Rops11g03556 1490 SMART sec7_5 594 781 IPR000904 GO:0005085|GO:0032012
Rops11g03556 1490 SUPERFAMILY Sec7 domain 595 784 IPR035999 GO:0005085|GO:0032012
Rops11g03556 1490 FunFam ARF guanine-nucleotide exchange factor GNOM 591 673 - -
Rops11g03556 1490 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 110 1465 - -
Rops11g03556 1490 Pfam Sec7 domain 598 781 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03556 Rops-Chr11 67990697 67996783 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03556 K18443 - gmx:100802024 2425.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00934 9 15150256 15157577 Rops11g03556 11 67990697 67996783 PCT