Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00891 ATGGAGGCTTTATGCAACAAGGGTGAAAATTTTCAAAAGAAAAGAGATGGGTTTCATTCTCCTGCTAAAGGAGCTAAGAACAAGTCCTCCACAAGTTCCAGTGGATCATGCTCCTCTGATTCAACTGAGGAAGCAAAAACAGCAAAAGGATCTTCTACTCCTACTCCTCTTGGTTGGCCTATTCGGAAGGCTACGGTCTCCAAGTGCGGCAAATCAGATGAAAAAGAAAATGAACCTATTTCTCACTTGGAAGATACAAAATTTAGTACCAGTATCAGTTCAAAAGTGGCTGGGGTTGATATGATGAAGGAAAGGTTTGCAAAATTATTACTCGGTGAAGATATGTCAGGATCTGGAAAAGGAGTCTGCACTGCTTTGGCTATCTCAAATGCTATTACTAATCTGTGTGCCACCGTATTTGGTCAATTATGGAGATTAGAGCCTCTGCCTTGTGAAAAGAAAGAAATGTGGCGGAGAGAGATGGAATGGCTTATTTGTGTTGGGGATCACATTGTTGAGTTAAGCCCTTCTTGGCAAACATTTCCAGATGGAAGTAAGCTTGAGGTAATGACTTGCAGGCCAAGGTCTGATCTTTTTATGAATCTTCCAGCTCTGCGTAAACTTGACAACATGATTCTTGAAATTTTAGATAGTTGCACAGATACAGAGTTTTGGTATGTTGATCAAGGAATTGTAGCCCCAGATGCAGATGGATCAGCTTCATTTCGCAAAAGAATTCAGCGGCAAGAGGAGAAGTGGTGGCTCCCTGTACCTCGTGTTCCCCCATCTGGTCTCAGTGAGAACTCAAGAAAGAAATTGAATCACACACGAGAATGTGCAAGCCAAATACTGAAAGCAGCCATGGCTATCAACAGCATTGCTTTAGCTGAAATGGAAGTTCCGGAGTCATATTTAGAAGCCCTTCCTAAGAATGGAAGAACTTGCTTGGGAGATTTTATTTACCGTTACATCACATCAGACCAATTCTCTCGGGAGTGCCTGCTTGATTGCATAGACCTCTCATCTGAGCATGTTGCACTAGAGATTGCTAACCGTGTAGAAGCCTCAATTTATGTATGGCGCAGAAGAGCTCACTCTAAACCCCCTCCTAATCCTAACCGTTCAACTACGAAGTCTTCCTGGGAAATTGTCAAGGACTTTATGGCTGATGGAGATAAGAGAGAATTGCTAGCTGAAAGAGCTGAAAATATTCTAATTTCATTGAAGCAACGCTTCCCAGGTTTAACTCAAACTACCTTGGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCCATACTAGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGGATAGATGATTTGCTATATGTGGATGACTTGACTAAACATTCAGATAGGTTTCCATTGGTTCCAACAGTTAATATGGTTTCTCAGAAGAAGGTTTCACATCCATTGGCAGTGTCTGTCTCAGGCACTCCACACACAGCAACCGTTGGCAAACATAGCTTTTCACCTGCACCACTAATTAGTCCTGCAAGGGGAGAGAGAACTCCTTTCCTCAGCAACAATAACAACAGCATCAAACCTCACCGTCGTGGCTTTGGGGTGAAAAGAGTATTGTCAAATTATCTTGGAGTAGAGACAAAACCAACAAAGGTGTTAACTGAGGTGAATAGTTCAAACCCAAGTAGCAATAAAACAGAACAGCCTCAGAAGGAATCATGTGCCGTGAAAAGCAAGACAAAATGA 1758 0.4209 MEALCNKGENFQKKRDGFHSPAKGAKNKSSTSSSGSCSSDSTEEAKTAKGSSTPTPLGWPIRKATVSKCGKSDEKENEPISHLEDTKFSTSISSKVAGVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKEMWRREMEWLICVGDHIVELSPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMILEILDSCTDTEFWYVDQGIVAPDADGSASFRKRIQRQEEKWWLPVPRVPPSGLSENSRKKLNHTRECASQILKAAMAINSIALAEMEVPESYLEALPKNGRTCLGDFIYRYITSDQFSRECLLDCIDLSSEHVALEIANRVEASIYVWRRRAHSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENILISLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPTVNMVSQKKVSHPLAVSVSGTPHTATVGKHSFSPAPLISPARGERTPFLSNNNNSIKPHRRGFGVKRVLSNYLGVETKPTKVLTEVNSSNPSSNKTEQPQKESCAVKSKTK* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00891 585 MobiDBLite consensus disorder prediction 557 585 - -
Rops9g00891 585 FunFam Rop guanine nucleotide exchange factor 14 331 470 - -
Rops9g00891 585 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 99 465 IPR005512 GO:0005085
Rops9g00891 585 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 25 523 IPR038937 GO:0005085
Rops9g00891 585 MobiDBLite consensus disorder prediction 557 575 - -
Rops9g00891 585 MobiDBLite consensus disorder prediction 7 22 - -
Rops9g00891 585 MobiDBLite consensus disorder prediction 1 61 - -
Rops9g00891 585 Gene3D PRONE domain, subdomain 1 91 333 - -
Rops9g00891 585 Gene3D PRONE domain, subdomain 1 334 470 - -
Rops9g00891 585 ProSiteProfiles PRONE domain profile. 89 471 IPR005512 GO:0005085
Rops9g00891 585 MobiDBLite consensus disorder prediction 24 54 - -
Rops9g00891 585 FunFam Rop guanine nucleotide exchange factor 1 90 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00891 Rops-Chr9 14532312 14535749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00891 - - gmx:100796692 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03603 11 69053133 69056628 Rops9g00891 9 14532312 14535749 ECH
Rops9g00891 9 14532312 14535749 Rops9g00891 9 14532312 14535749 ECH
Rops11g03603 11 69053133 69056628 Rops9g00891 9 14532312 14535749 PCT