Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03603 ATGGAAGCTTTATCAAAAAAGAGTGAAAACTCTCTAAAGATAAGAGATGGGGTTCGGTCTTGTCTCACTGATTCAAGTGCTGAGTCTAGAGAAACCAGTTTCAGTGGCTCAAGCTCCTCAGTTTCTACTGAAGAAGCAAAAACAAAAGGGTCTTCTTCACCTGCTCCTCTTGGTTGGCCTATTCTCAAGGCTGCAATCTCCAAATGCTCAAATTCTGATGAAAAAGAAAATAAACATAAATCCCACTTGGAAGACACAAAATTTACCAGTATCAATTTGAAAATGTCAGATGTTGACATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAGGGGGTATGCACTGCTTTGGCCATATCAAATGCCATTACCAATCTCTGTGCTACTGTATTCGGGCAATTATGGAGACTAGAACCTCTACCTTCTGAGAAGAAAGAAATGTGGCGGAGAGAGATGGAATGGCTTGTTAGTGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTCCCTGATGGAAGTAAGCTCGAGGTAATGACTTGCAGGCCCAGGACAGACATCTTTATCAATCTTCCAGCTCTTCGCAAACTCGACAACATGCTTCTTGAAATTTTAGACAGTTTCACTGCTACAGAGTTTTGGTATGTTGACCAAGGAATTGTAGCCCCAGATGCAGATGGTTCAGCCTCTTTCCGCAAAACAATTCAAAGGCAAGAAGAGAAGTGGTGGCTGCCAGTACCACGTGTTCCCACTGATGGTCTCAGTGAGAACTCAAGAAAGCAGTTGAATCACTCTAGAGAATGTGCAAGCCAAATACTAAAAGCAGCCATGGCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCAGAGACATATTTGGAAGTCCTCCCTAAGAATGGAAGAACCTGCCTAGGGGATTTTATCTACCGTTACATTACATCAGATCAATTCTCCCCGGAGTGCCTGCTTGATTGCTTAGACCTCTCCTCTGAACATGTTGCACTAGAGATTGCCAACCGTGTGGAAGCAGCAATTCATGTGTGGCGTAGAAGAGCTCACTCAAGGTCCACACCTATTCCCAACCGTTCAACTAAGTCATCCTGGGAGATAGTCAAGGACTTCATGGTTGATGGAGATAAGAGAGAACTGCTAGCAGATAGAGCAGAAAACATTCTAATTTCCTTGAAGCAGCGGTTCCCAGGCTTAACTCAAACTACCCTTGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCATTCTGGAGAGCTACTCTAGAGTTTTGGAGAGCATGGCTTTTAACATTGTATCCCGGATTGATGATTTGCTTTATGTGGATGACTTGACAAAACATTCAGACAAATATGCATTGGTTCCTACAGTTAATGCGGTTTCTCAGCAGAATGTTTCACGTCCATTTTCAGTGTCTGTCTCAGGCACTCCACACAAAGCAGCAGTTGGCACACCTAGCTTTTCATCAGTGCCACTAATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCAACAACAACAATAACAACAACACCATCAAACCTCATCGTCGTGGCTTTGGGGTGAAAAGGGTATTGTCAAATTATCTTGGAGGAGAGAATAAAACAAAGATATGTAGCAATTCAACTGAGGTGAATTGTTCAAACCCAAGTAACAAGAAAACAGAACACCAAGAACAACAACGTCAGAAGGAATCATGGGCTGTGAAAAACGAGACAAAATTGAGTGCAAATTTGTCCCTTGAAGCAAGGCATTGTTAG 1812 0.4249 MEALSKKSENSLKIRDGVRSCLTDSSAESRETSFSGSSSSVSTEEAKTKGSSSPAPLGWPILKAAISKCSNSDEKENKHKSHLEDTKFTSINLKMSDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRTDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAPDADGSASFRKTIQRQEEKWWLPVPRVPTDGLSENSRKQLNHSRECASQILKAAMAINSIALAEMEVPETYLEVLPKNGRTCLGDFIYRYITSDQFSPECLLDCLDLSSEHVALEIANRVEAAIHVWRRRAHSRSTPIPNRSTKSSWEIVKDFMVDGDKRELLADRAENILISLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVSRIDDLLYVDDLTKHSDKYALVPTVNAVSQQNVSRPFSVSVSGTPHKAAVGTPSFSSVPLISPARGERTPFLNNNNNNNTIKPHRRGFGVKRVLSNYLGGENKTKICSNSTEVNCSNPSNKKTEHQEQQRQKESWAVKNETKLSANLSLEARHC* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03603 603 Gene3D PRONE domain, subdomain 1 328 469 - -
Rops11g03603 603 Gene3D PRONE domain, subdomain 1 91 327 - -
Rops11g03603 603 FunFam Rop guanine nucleotide exchange factor 14 330 468 - -
Rops11g03603 603 MobiDBLite consensus disorder prediction 15 56 - -
Rops11g03603 603 MobiDBLite consensus disorder prediction 22 50 - -
Rops11g03603 603 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 463 IPR005512 GO:0005085
Rops11g03603 603 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 26 521 IPR038937 GO:0005085
Rops11g03603 603 MobiDBLite consensus disorder prediction 559 584 - -
Rops11g03603 603 ProSiteProfiles PRONE domain profile. 88 469 IPR005512 GO:0005085
Rops11g03603 603 FunFam Rop guanine nucleotide exchange factor 1 89 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03603 Rops-Chr11 69053133 69056628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03603 - - gmx:100796692 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03603 11 69053133 69056628 Rops11g03603 11 69053133 69056628 ECH
Rops11g03603 11 69053133 69056628 Rops9g00891 9 14532312 14535749 ECH
Rops11g03603 11 69053133 69056628 Rops9g00891 9 14532312 14535749 PCT