Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00883 ATGGTCACTCTGGCGGTGAAGAACGTTTATGAGGAAGAAGAGGAGCTTACGCTGCTTTGTGAGATAGATAATGATGGTGGAGATGTTCAAATCCCAGAAACTGCTCATCAAATTAGCACCGATTCATGGTTTCAAGTGGGGTTTGTGCTCACCACGGGAATCAACAGTGCTTATGTGCTTGGTTATTCTGGGACCATCATGGTTCCCCTTGGTTGGATAGGGGGTGTGGTTGGTTTAATTCTTGCAACAGCAATATCACTCTATGCAAATGCTCTTATTGCTATGTTACATGAATTTGGAGGAACCAGGCATATTAGATACCGTGATCTTGCTGGATATATATACGGTAGAAAAGCATATTGCCTCACATGGGCTCTGCAGTATGTCAATCTTTTCATGATAAATGCTGGCTACATCATTTTGGCTGGTTCGGCTTTAAAGGCCGTTTATGTTCTATTTAGGGATGACGATCTGATGAAGCTTCCTTATTTTATTGCAATAGCTGGATTTGTTTGTGCAATGTTTGCCATTTGCATTCCCCATCTTTCAGCACTTGGAATTTGGCTGGGATTTTCAACAGTCTTCAGCCTAGTATATATTGTAATAGCATTTGTACTGTCACTTAAAGATGGAATAAAATCACCAGCTCGAGATTATAGTATTCCAGGGACATCAACAAGTAAAATATTTACAGCAATTGGGGCATCTGCGAATCTTGTGTTTGCATATAACACAGGAATGCTTCCTGAGATACAGGCAACAATCAGGCAGCCAGTTGTTAAAAACATGATGAAAGCCCTGTACTTTCAGTTTACTGTTGGAGTTCTGCCATTATATCTGGTTGCCTTTGCAGGGTACTGGGCTTATGGATCTTCAACAGAAACCTATTTGCTGAACAATGTCAATGGTCCAACCTGGGTGAAGGCCTTGGCCAATATTACAGCCTTTCTTCAATCAATAATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACCAAACATGGCATCAAGGGGAGTGCACTGAATTTTAAGAACTTGTCATTTAGAGTCTTGGTAAGAGGTGGCTACTTGACTTTGAATACATTTGTTTCAGCTCTATTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGAGCAATCAGCACATTTCCCCTTACATTCATCCTTGCAAACCATATGTACCTAGTGGCAAATAAGAACAAACTAACATCCATTCAAAAGCTCTGGCATTGGATCAACATTTGTTTCTTTGGCATCATGTCTGTTGCAGCAACTGTTGCATCGTTGCGGCTTATTGCTTTAGACTCCGAAACGTATCACCTTTTTGCGGATTTATGA 1350 0.4074 MVTLAVKNVYEEEEELTLLCEIDNDGGDVQIPETAHQISTDSWFQVGFVLTTGINSAYVLGYSGTIMVPLGWIGGVVGLILATAISLYANALIAMLHEFGGTRHIRYRDLAGYIYGRKAYCLTWALQYVNLFMINAGYIILAGSALKAVYVLFRDDDLMKLPYFIAIAGFVCAMFAICIPHLSALGIWLGFSTVFSLVYIVIAFVLSLKDGIKSPARDYSIPGTSTSKIFTAIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVAFAGYWAYGSSTETYLLNNVNGPTWVKALANITAFLQSIIALHIFASPMYEYLDTKHGIKGSALNFKNLSFRVLVRGGYLTLNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVANKNKLTSIQKLWHWINICFFGIMSVAATVASLRLIALDSETYHLFADL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00883 449 Pfam Transmembrane amino acid transporter protein 40 431 IPR013057 -
Rops9g00883 449 PANTHER OS05G0424000 PROTEIN-RELATED 38 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00883 Rops-Chr9 14308473 14312137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00883 67 449 Organic Solute Cotransporters AT2G39890 75.979 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00883 K26247 - gmx:100500168 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00883 9 14308473 14312137 Rops9g00883 9 14308473 14312137 ECH
Rops11g03614 11 69222916 69226243 Rops9g00883 9 14308473 14312137 PCT