Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03614 ATGGGGCTAGATGTTGAACATGATTCAAACAAGGTTTTTGCCGAGGATGTTGAAGTCCCAGATACTGCACATCAGATTAGCACTGATTCGTGGTTTCAAGTGGCATTTGTCCTCACCACTGGAGTGAACAGTGCTTATGTGCTTGGATATTCAGGGACCATCATGGTTCCCCTGGGTTGGATAGGGGGAGTAGTAGGTCTAATTCTTGGTGCCCTGGTATCGCTTTATGCAAATGCTCTTATTGCTAAGCTCCATGAATATGGAGGGACAAGGCACATTAGATATAGAGATCTTGCAGGAGCTGTATACGGTAAGAGAGCATATAAGCTCACATGGTTTCTGCAGTACATCAATCTTTTCATGATAAATATCGGCTACATCATTTTGGCCGGTTCAGCTTTGAAGGCTACTTATGTTCTATTTACGGATGATCATCTGATGAAGCTTCCATATTTTATTGCCATAACTGGATTTGTGTGTATTATGTTTGCCATTTGTATTCCTCATCTTTCAGCTCTTGGAATTTGGTTGGGAGTTTCAACAGTCTTCAGCCTAGCATATATTTTAATAGGAGTTGGGCTATCGATTAAAGATGGAATGCAATCACCAGCTCGAGATTACAGTATTCCAGAACATGGTGCAACTAAAATATTTACAATAATTGGGGCATCTGCTAATCTTGTGTTCGCCTATAATACTGGCATGCTTCCTGAGATACAGGCAACAGTTAGGCAGCCAGTTGTCAAGAACACAATGAAAGCCCTGTACTTTCAGTTTACTGCTGGAAGTGTACCATTGTACCTGATTACCTTTGTAGGATACTGGGCTTATGGATCTTCCACAGAAACTTACTTGCTGAATAGTGTAAATGGTCCAGTCTGGGTGAAGGCTTTGGCCAATATTTCAGCCTTTCTTCAATCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACTAGATATGGGATCAAAGGAAGTGCAATGAATGTTAGGAACTTGTCATTTCGAGTCGGGGTGAGAGTGGCAAAGAAGGACGATTTATCATCCTTACAAAAGCTCTGGCACTGGCTCAACATTTGTTTTTTTGGCCTCATGTCCCTTGCAGCAACAATTGCATCCTTACGGCTTATTGCAAAAGACTCCAAAACATTCCATGTTTTCGCTGATGTGTGA 1188 0.4133 MGLDVEHDSNKVFAEDVEVPDTAHQISTDSWFQVAFVLTTGVNSAYVLGYSGTIMVPLGWIGGVVGLILGALVSLYANALIAKLHEYGGTRHIRYRDLAGAVYGKRAYKLTWFLQYINLFMINIGYIILAGSALKATYVLFTDDHLMKLPYFIAITGFVCIMFAICIPHLSALGIWLGVSTVFSLAYILIGVGLSIKDGMQSPARDYSIPEHGATKIFTIIGASANLVFAYNTGMLPEIQATVRQPVVKNTMKALYFQFTAGSVPLYLITFVGYWAYGSSTETYLLNSVNGPVWVKALANISAFLQSVIALHIFASPMYEYLDTRYGIKGSAMNVRNLSFRVGVRVAKKDDLSSLQKLWHWLNICFFGLMSLAATIASLRLIAKDSKTFHVFADV* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03614 395 Pfam Transmembrane amino acid transporter protein 28 342 IPR013057 -
Rops11g03614 395 PANTHER OS05G0424000 PROTEIN-RELATED 26 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03614 Rops-Chr11 69222916 69226243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03614 55 395 Organic Solute Cotransporters AT3G55740 66.057 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03614 K26247 - gmx:100778997 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03614 11 69222916 69226243 Rops11g03614 11 69222916 69226243 ECH
Rops11g03614 11 69222916 69226243 Rops9g00883 9 14308473 14312137 PCT