Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00879 ATGAAGGATTTGAGCCGTTTCTTCACGATCGGGTTAGTGTCGGCATGCTATGTTGCTATAGCGTGGTTGAAGATGGTTCCCATGCAGACAATTAGGTCACGTGTTCAATTCTTCAAGATCGCAGCACTCAGCTTCGTTTTCTGCATCTCCGTCGTGTTTGGTAACATTTCCCTCCGTTATCTTCCCGTTTCTTTTAACCAGGCTGTCGGCGCCACAACGCCGTTCTTCACCGCCGTTTTCGCTTACCTCATGACGTTCAAGAGAGAGGCTTGGCTTACGTATCTTGCTCTTGTTCCTGTTGTTACTGGTGTTATCATTGCCAGCGGGGGTGAACCGAGCTTCCATTTATTTGGGTTCATTATATGTGTTGCAGCTACGGCTGCTCGTGCCCTGAAATCAGTGTTACAAGGAATTTTGCTTTCTGCTGAAGGAGAGAAGCTGAATTCTATGAACCTCCTCCTTTACATGGCTCCAATTGCTGTTGTTTTCCTTCTTCCTGCTACCCTTGTAATGGAAGAAAATGTGGTTGGCATTACTCTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCGTATTTTGTCAACCTGACCAATTTTTTGGTGACAAAACATACCAGTGCTCTCACCCTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTGATATTTAGAAACCCAGTGTCAGTTACTGGAATGATGGGTTATTCGCTCACGGTCCTTGGAGTTGTACTTTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 807 0.4498 MKDLSRFFTIGLVSACYVAIAWLKMVPMQTIRSRVQFFKIAALSFVFCISVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTFKREAWLTYLALVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSAEGEKLNSMNLLLYMAPIAVVFLLPATLVMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVLGVVLYSEAKKRSK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00879 268 PANTHER SOLUTE CARRIER FAMILY 35 16 265 - -
Rops9g00879 268 SUPERFAMILY Multidrug resistance efflux transporter EmrE 16 110 - -
Rops9g00879 268 Pfam Triose-phosphate Transporter family 13 261 IPR004853 -
Rops9g00879 268 SUPERFAMILY Multidrug resistance efflux transporter EmrE 159 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00879 Rops-Chr9 14280590 14284029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00879 7 268 Organic Solute Cotransporters AT3G11320 87.594 5.15e-171 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00879 - - gmx:100806704 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03616 11 69236567 69242699 Rops9g00879 9 14280590 14284029 ECH
Rops9g00879 9 14280590 14284029 Rops9g00879 9 14280590 14284029 ECH
Rops11g03616 11 69236567 69242699 Rops9g00879 9 14280590 14284029 PCT