Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03616 ATGGCTCAAATTGCTCTTATTGTTCCAGCAACTACAATAGCAATTACTGGAAAAGGGAAGCAATTGAGGGAGCTCTCTGCTTACAAAATGAGCTCACTAAGTTGGAGGATTGAAAGGCTTCCATGTTTTGTTTCCACTGTTTCCTCAAATTCATATGGTGATAGAAGTGCTGTGGTGAAGGTATCTGAAGGAGGAGCCATCTCTCTCCCTCATCATACTTGGACAGTGGAAAAGGGTTCTGAAGATCAAAGAGGTGGGAGAATGAAGGGTTCGAGCCGTTTCTTCACAATAGGGCTTGTGGCAGCATGGTACTCTTCAAACATTGGGGTATTGCTGTTGAACAAGTACTTGCTCAGCAACTATGGATTCAAGTACCCGATCTTTCTAACCATGTGCCACATGACAGCGTGTTCCTTGCTCAGTTATGTTGCCATAGCGTGGATGAAAGTGGTGCCTATGCAGACAATTCGATCCAGGGTTCAGTTTTTCAAGATCTCTGCTCTTAGTCTTATTTTCTGTGTCTCTGTTGTATTTGGGAACATTTCGCTTCGTTACCTTCCTGTGTCTTTTAACCAAGCCATTGGTGCCACCACGCCTTTCTTCACTGCTATTTTTGCTTACATTATGACTTTCAAGAGGGAGGCTTGGCTTACTTATCTTGCCCTTGTTCCTGTTGTTGCTGGGGTTGTCGTTGCCAGTGGGGGTGAACCGAGTTTCCATTTATTTGGATTCATAGTATGTGTTGCAGCTACAGCTGCAAGGGCCTTAAAATCAGTGTTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTTCTCCTTCCTGCTACACTTATAATGGAAGAAAATGTGGTTGGCATCACATTGGCTCTCGCCAGAGATGATGTCAAGATCATCTGGTATCTGCTATTTAACTCGGCACTTGCTTATTTTGTCAACCTGACCAATTTTTTGGTCACGAAACATACAAGTGCTCTGACCCTTCAGGTACTAGGAAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTAATATTCAGAAATCCAGTGTCAGTCACTGGAATGCTGGGTTACACGCTCACAGTCCTTGGAGTAGTACTTTACAGTGAAGCCAAAAAACGAAGCAAGTGA 1182 0.434 MAQIALIVPATTIAITGKGKQLRELSAYKMSSLSWRIERLPCFVSTVSSNSYGDRSAVVKVSEGGAISLPHHTWTVEKGSEDQRGGRMKGSSRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKVVPMQTIRSRVQFFKISALSLIFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAIFAYIMTFKREAWLTYLALVPVVAGVVVASGGEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYTLTVLGVVLYSEAKKRSK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03616 393 PANTHER SOLUTE CARRIER FAMILY 35 96 390 - -
Rops11g03616 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 284 387 - -
Rops11g03616 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 137 235 - -
Rops11g03616 393 Pfam Triose-phosphate Transporter family 99 386 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03616 Rops-Chr11 69236567 69242699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03616 87 393 Organic Solute Cotransporters AT3G11320 89.902 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03616 - - vra:106757848 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03616 11 69236567 69242699 Rops9g00879 9 14280590 14284029 ECH
Rops11g03616 11 69236567 69242699 Rops11g03616 11 69236567 69242699 ECH
Rops11g03616 11 69236567 69242699 Rops9g00879 9 14280590 14284029 PCT