Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00855 ATGGTTGATATAGATTGGAAATCAAAGATGGTCAACACAAACATGCCTCCCAAATCCCCGAAACTCTCCCTCCCAGAAAAACCCATACCCACCATGCCATTACCCACTTTACAACCACCCCTTCGACCAAACGACATCTCAACAGCGTCGTCCACGGTTTGCGCCGCGTACGACAACTATCTTTGCCTTCCTCAGCTCAGAAAGCTTTGGGCCTCCAACGACTTCCCCAATTGGACCAACGAGCCCATCTTAAAGCCCGCTTTACAAGCTCTCGAAATCACATTCCATTTTGTCGCAACCGTTTTATCAGACCCAAGACCCTACGTGAATCGGCGCGAGTGGACCCGGCGAGTCGAGTCGCTCGCCAAGGACCAGGTCCAAATCATCGCTATGCTCTGCGAAGAAGAGGAACAAAACCCCGAGACACGTGGCATGGCTCCAGTTGCTGACATCGACGGCATCAGCAAGACCAGAACCTACAGCGAGGCAAGCTTGCTTCCACGGCTTGCCACGTGGCAGAAATCCAAGGACGTGGCACAGAGGATCCTTTCCACCGTGGAATGCGAGATGATGAGGTGTCCGTACACGTTGGGTTTAGGGGAAGCGAATCGAAACGGAAAACAAGTCCTCCGTTACGACGCCGTTTGCAAGCCAAATGAGATAAACTCACTCGAAACGACGCCGTATGATCAGGTAGCGAACTACGAGAACCGTACGTTACACGCGACGCACCAGATCGTGGAGTCATGGGCACGCGCCTCGCTGGGATTACTAGAGAGAGCGACGGAGGCGGTGGAAAATGGAAGGTTCGAGAAGGCGGCGAGTGATTGCTACACGGTGGAACGGATCTGGAAGTTTCTAACGGAAGTGGAAGATTTACACGTGATGATGGATCCGGAGGATTTTCTGAGGGTGAAGAAACAGTTAGGGATAAAGTCATGGGGTGAAACGGTGCCGTTTTGCTTCAGGTCGAAGGGTTTAGTGGAAATGACGAAGGTGTGTAGGGATCTGAAGCATAAGGTGCCGGAGATATTGGAGGTGGAGGTGGACCCCAAGGGTGGACCAAGGATGATGGAGGCGGCAATGAAGGTGTACGCGGAGAAGAAGAGGAGTGGGTTCGAGAAGATTCACGTGCTGCAAGCGATGCAGGGGATTGAGTCGGCGATGAAGAGGTTCTTCTACGCGTATAAGCAGGTGGTGACGGTTCTGATGGGGAGTTCAGAGGCTAATGGGAACGCTTATGACTCGTTGACTCAGATATTCCTCGAACCTACGTATTTCCCTAGCTTGGATGCTGCTAAGACTTTTCTGGGCTATTATTGGGAAAATAATGAAACTACAATTTATTGTTAA 1353 0.5137 MVDIDWKSKMVNTNMPPKSPKLSLPEKPIPTMPLPTLQPPLRPNDISTASSTVCAAYDNYLCLPQLRKLWASNDFPNWTNEPILKPALQALEITFHFVATVLSDPRPYVNRREWTRRVESLAKDQVQIIAMLCEEEEQNPETRGMAPVADIDGISKTRTYSEASLLPRLATWQKSKDVAQRILSTVECEMMRCPYTLGLGEANRNGKQVLRYDAVCKPNEINSLETTPYDQVANYENRTLHATHQIVESWARASLGLLERATEAVENGRFEKAASDCYTVERIWKFLTEVEDLHVMMDPEDFLRVKKQLGIKSWGETVPFCFRSKGLVEMTKVCRDLKHKVPEILEVEVDPKGGPRMMEAAMKVYAEKKRSGFEKIHVLQAMQGIESAMKRFFYAYKQVVTVLMGSSEANGNAYDSLTQIFLEPTYFPSLDAAKTFLGYYWENNETTIYC* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00855 450 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 212 437 IPR037217 GO:0019441|GO:0020037|GO:0046872
Rops9g00855 450 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 446 IPR038759 -
Rops9g00855 450 Gene3D - 210 318 - -
Rops9g00855 450 Pfam Hs1pro-1 N-terminus 1 187 IPR009869 GO:0006952
Rops9g00855 450 Pfam Hs1pro-1 protein C-terminus 190 443 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00855 Rops-Chr9 13944416 13945972 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00855 - - gmx:100778560 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00855 9 13944416 13945972 Rops9g00855 9 13944416 13945972 ECH
Rops11g03978 11 74030668 74032279 Rops9g00855 9 13944416 13945972 PCT