Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03978 ATGGTTGATTTACATTGGAAATCAAAGATGCCAAGTTCTGACATGTCTTCCAAGACACCAAAACTCTCTCTCTCCGAAAAGTCCTCACCCCGCAGCAACTCCCTACCCTCTCTGCAACTACCCTTCATCGCCAACGATATCTCCGCCGCGGCGCCACCGCTTTGCGCCGCCTACGATCACTACCTCCGCCTCCCGGAGCTCCGAAAGCTTTGGAACACGAGGGACTTTCCCAATTGGACCAACGAACCAGTCCTGAAACCAGCCTTACAAGCACTGGAGATCACGTTTCGCTTCCTCTCCATAGTTTTCTCCGACATCAGACCGTACGCGAACCGCAGAGAATGGAACCGCAGGGTGGAGTCCCTCGCCACGCGTCAGATCGAGATCATCTCAATGCTCTGCGAGGATGAGGAACAAAACCCCGACACACGTGGAACAGCACCAACGGCTGATCTCAGCAGCAACGATTGTGATAGCAAAAGAAGCTACAGCGAGGCTAGCCTGCTTCCACGGCTTGCCACGTGGTACAAATCCAAGGACGTCGCACAGAGGATTCTACTCTCCGTTGAATGCCAGATGAGGAGGTGCCCCTACACGCTAGGTTTGGGTGAACCGAACCTCGCAGGGAAACCGAGCCTCAAATACGACGCCCTGTGCAAACCGAACGAGGTCCACTTACTGAAAACGACGCCGTACGACGATCGTATTGAGAACTACGAGAACCACACGGTGCAGGTGACGCACCAGATCGTGGAGTCGTGGATCCACGTGTCACGGAAGCTTCTAGAGAGGATCGGGGAATCGATCGAGGGAAGAAGGTTCGAGAAGGCGACGGAGGATTGCTACACGGTGGAGAAAATCTGGAAGCTTCTAACGGAAGTGGAGGACGTTCACCTGATGATGGACCCTGGCGATTTCTTGAGGCTGAAGAATCAACTCTCGATGAAATCTTCGTGCGGTGAAACGGCGTCGTTTTGTTTCCGTTCGAAGGAACTTGTGGAGGTGACCAAGCTTTGCCAGGATCTGAGGCATAAGGTGCCGGAGATATTGGAGGTTGAGGTGGACCCCAAGGGTGGCCCAAGGATTCAAGAGGCGGCGATGAAGCTTTATGTGGCGGAGAAGGTGAGTGGGTTGGAGAAGGTTCACGTGCTTCAGGCGATGCAGGCTATTGAGGCTGCCATGAAGAGGTTCTTCTACGCGTATAAGCAGGTGTTGACGGTGGTGATGGGAAGCTCCGAGGCCAATGGGAACCGAGTTGGGTTGAGTTCTGAGGGGGGTGACTCGTTGACTCAGTTGTTCCTTGAACCTACGTATTTTCCAAGCTTGGATGCTGCTAAGACGTTTCTTGGATACATTTGGGATAATGATAATAAATTACGCTTTGGATAA 1389 0.5292 MVDLHWKSKMPSSDMSSKTPKLSLSEKSSPRSNSLPSLQLPFIANDISAAAPPLCAAYDHYLRLPELRKLWNTRDFPNWTNEPVLKPALQALEITFRFLSIVFSDIRPYANRREWNRRVESLATRQIEIISMLCEDEEQNPDTRGTAPTADLSSNDCDSKRSYSEASLLPRLATWYKSKDVAQRILLSVECQMRRCPYTLGLGEPNLAGKPSLKYDALCKPNEVHLLKTTPYDDRIENYENHTVQVTHQIVESWIHVSRKLLERIGESIEGRRFEKATEDCYTVEKIWKLLTEVEDVHLMMDPGDFLRLKNQLSMKSSCGETASFCFRSKELVEVTKLCQDLRHKVPEILEVEVDPKGGPRIQEAAMKLYVAEKVSGLEKVHVLQAMQAIEAAMKRFFYAYKQVLTVVMGSSEANGNRVGLSSEGGDSLTQLFLEPTYFPSLDAAKTFLGYIWDNDNKLRFG* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03978 462 Gene3D - 213 448 - -
Rops11g03978 462 Pfam Hs1pro-1 protein C-terminus 193 455 IPR009743 -
Rops11g03978 462 MobiDBLite consensus disorder prediction 143 160 - -
Rops11g03978 462 MobiDBLite consensus disorder prediction 1 33 - -
Rops11g03978 462 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 215 449 IPR037217 GO:0019441|GO:0020037|GO:0046872
Rops11g03978 462 MobiDBLite consensus disorder prediction 10 33 - -
Rops11g03978 462 MobiDBLite consensus disorder prediction 138 160 - -
Rops11g03978 462 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 458 IPR038759 -
Rops11g03978 462 Pfam Hs1pro-1 N-terminus 1 190 IPR009869 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03978 Rops-Chr11 74030668 74032279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03978 - - psat:127083938 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03978 11 74030668 74032279 Rops11g03978 11 74030668 74032279 ECH
Rops11g03978 11 74030668 74032279 Rops9g00855 9 13944416 13945972 PCT