Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00851 ATGATGTCAAGCCTTAATGAAACGATTGAGCGTGATGAAAGAGAAGAAGAGAAGCCAGGTAGTTCTTCACGTTCTAGCTTGAAAAGCCTTCTTTGGCATGGTGGGTCTGTTTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCACAGGTTCTGTTGACACTGCCATACTCTTTCTCTCAGTTAGGAATTATTTCAGGCATCGTATTCCAAATCTTCTATGGCTTGCTTGGTAGTTGGACTGCTTATTTGATTAGCATTCTGTACATTGAGTACAGGAGCAGAAAAGAGAAAGAGAATGTCAACTTCAAAAGTCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTACTTGGTCCATATTGGAAAGCTATTGGATTGGCCTTCAATTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTCATAGCTTGTGCAAGTAACATTTACTACATAAATGACCACTTGGACAAGAGGACTTGGACTTACATTTTTGGAGCTTGTTGTGCCACCACAGTGTTCATACCCTCATTCCATAACTATAGGCTTTGGTCTTTCCTTGGCCTTGGCATGACCACATACACTGCTTGGTACTTGACCATTGCAGCCCTTGTTCATGGCCAGGTTGAAAATGTGACTCACACGGGCCCAAAGAAATTGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAGAAGTTCAAATATATCTATCTTTTTGCTACTCTTTATGTGTTCACCCTTACCCTACCATCTGCTAGTGCTGTATACTGGGCCTTTGGTGACCAACTTTTGGACCATTCCAATGCTTTCTCTCTTCTCCCTCGCTCTGGCTGGCGTGATGCTGGTGTTGTCTTAATGCTTATTCACCAGTTCATCACATTTGGATTTGCTTGTACACCATTGTACTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATTTGTTTGAGGGCTCTTGCAAGGTTACCTGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGTCCCATTAACTCTGCTGTGGGGGCACTTTTGGTTAGCTTCACCGTCTATATCATCCCTGCTGCCGCCCATATGCTCACTTACAAGTCTGCTTCAGCAAGACAGAATGCTGCTGAGAAATTGCCCTTCTTCATCCCAAGCTGGACTGCAATGTATGTGGTCAATGCATTTGTGGTGGTGTGGGTTTTGGTGGTAGGTTTTGGATTTGGAGGGTGGGCTAGCATGGCAAACTTCATCAAACAAGTTGACACATTTGGACTATTTACCAAGTGCTACCAGTGCCCACCAAAAGTCCCAGCTTCCAACCACACACTTCATCACTGA 1410 0.4404 MMSSLNETIERDEREEEKPGSSSRSSLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGIISGIVFQIFYGLLGSWTAYLISILYIEYRSRKEKENVNFKSHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAALVHGQVENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTLPSASAVYWAFGDQLLDHSNAFSLLPRSGWRDAGVVLMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPAAAHMLTYKSASARQNAAEKLPFFIPSWTAMYVVNAFVVVWVLVVGFGFGGWASMANFIKQVDTFGLFTKCYQCPPKVPASNHTLHH* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00851 469 MobiDBLite consensus disorder prediction 1 26 - -
Rops9g00851 469 PANTHER OS05G0424000 PROTEIN-RELATED 39 421 - -
Rops9g00851 469 Pfam Transmembrane amino acid transporter protein 33 426 IPR013057 -
Rops9g00851 469 MobiDBLite consensus disorder prediction 7 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00851 Rops-Chr9 13899897 13904778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00851 13 456 Organic Solute Cotransporters AT2G21050 79.730 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00851 K13946 - gmx:100817572 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03977 11 73990572 73994695 Rops9g00851 9 13899897 13904778 ECH
Rops9g00851 9 13899897 13904778 Rops9g00851 9 13899897 13904778 ECH
Rops11g03977 11 73990572 73994695 Rops9g00851 9 13899897 13904778 PCT