Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03977 ATGTCAACCCAGAAGCAAGCTGAAGAAGCCATCATGCCAAGCCTCACTCAAACGATTGAGCGTGAAGAGGGAGAGGAAGTGAAGGAGGATGAATCACAAATTAGCTTAAAAAATCTTCTCTGGCATGGTGGTTCTGCCTATGATGCATGGTTCAGCTGTGCCTCAAATCAGGTTGCCCAGGTTCTGTTAACTCTGCCTTACTCTTTCTCTCAGCTGGGAATGCTTTCAGGCATCATATTCCAAGTCGTCTATGGCCTGCTTGGTAGCTGGACTGCTTACTTAATCAGCATTCTGTACATTGAATACCGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTCGAAGTGTTGGAAGGCTTATTGGGCACATACTGGAAAGCAGTTGGATTGGCCTTCAATTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGTGCAAGTAATATATACTACATAAATGACCACTTGGACAAAAGAACTTGGACCTACATTTTTGGAGCTTGCTGTGCCACCACAGTGTTTGTACCGTCATTTCACAACTATAGGATTTGGTCCTTCCTTGGCCTTGGCATGACCACCTTCACTGCTTGGTATTTGACTATTGCAGCCCTTATTCATGGCCAGGTTGAAAATGTGACGCACACGGGCCCAAACAAGTTGGTTTTATATTTCACAGGCGCCACCAACATATTGTACACTTTCGGTGGACACGCCGTTACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAATTCAAATATATATATCTTTATGCCACTCTTTATGTGTTCACCCTCACCCTACCATCAGCTATTGCCGTTTATTGGGCCTTCGGTGACCAACTTCTGGATCACTCTAATGCCTTCTCACTCCTCCCTCGCTCTGGCTGGCGTGACACTGCTGTTATCCTAATGCTCATTCATCAGTTCATTACCTTTGGATTTGCTTGTACACCATTGTACTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCGTTTGTTTGAGGGCTCTAGCCCGTTTACCTGTGGTTATACCAATATGGTTTCTGGCTATTATTTTCCCTTTCTTTGGGCCCATAAACTCAGCTGTTGGGGCCCTTTTGGTCAGCTTCACTGTTTACATCATCCCTGCTGCTGCTCATATGCTCACCTACAGGTCTGCCTCCGCAAGACAGAATGCTGCAGAGAAATTGCCGGTCTTCGTCCCTAACTGGACAGTGATGTATGTGGTGAATGCATTTGTGGTGGTGTGGGTTCTGGTGGTGGGCTTTGGATTTGGAGGGTGGGCCAGCATGACAAACTTCATCAGACAGGTTGACACATTTGGACTATTTGCCAAATGCTACCAGTGTCCACCACAAGTAATGGCCTCCAACCACACCTTGCATCACTGA 1437 0.4579 MSTQKQAEEAIMPSLTQTIEREEGEEVKEDESQISLKNLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQVVYGLLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGTYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLGMTTFTAWYLTIAALIHGQVENVTHTGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSVCLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPAAAHMLTYRSASARQNAAEKLPVFVPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIRQVDTFGLFAKCYQCPPQVMASNHTLHH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03977 478 PANTHER OS05G0424000 PROTEIN-RELATED 48 429 - -
Rops11g03977 478 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03977 Rops-Chr11 73990572 73994695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03977 1 465 Organic Solute Cotransporters AT2G21050 76.774 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03977 K13946 - gmx:100795466 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03977 11 73990572 73994695 Rops11g03977 11 73990572 73994695 ECH
Rops11g03977 11 73990572 73994695 Rops9g00851 9 13899897 13904778 ECH
Rops11g03977 11 73990572 73994695 Rops9g00851 9 13899897 13904778 PCT