Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00839 ATGGGAAGGTTGTTTGTGACCCATCTGGAAGGGAAGATCTATAGCTGCAAACACTGTAGGACCCATCTTGCTCTTTGTGAAGACATCGTTTCCAAGGCTTTTCACAGCAGACATGGGAGAGCTTATCTCTTCAGTAAGGTTGTGAATGTTTCTCTCGGAGAAAAAGAGGACAGACAGATGCTCACTGGGATGCATACTGTGGCTGACATTTTCTGTGTGGGTTGTGGATCAATTGTTGGCTGGAAATATGAGGTTGCCCATGAAAAAGGCCAGAAGTACAAGGAAGGAAAATCTGTTCTTGAACGGTTCAAGGTGTCAGGTCCTGATGGCAGCAGTTATTGGGTAAGCCATGAAGCACATGTTGGTGGAAGTGATGCAGATGATGCTTAG 390 0.4564 MGRLFVTHLEGKIYSCKHCRTHLALCEDIVSKAFHSRHGRAYLFSKVVNVSLGEKEDRQMLTGMHTVADIFCVGCGSIVGWKYEVAHEKGQKYKEGKSVLERFKVSGPDGSSYWVSHEAHVGGSDADDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00839 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Rops9g00839 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 105 IPR004910 -
Rops9g00839 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00839 Rops-Chr9 13004618 13007894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00839 - - cit:102609322 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03971 11 73890721 73895667 Rops9g00839 9 13004618 13007894 ECH
Rops9g00839 9 13004618 13007894 Rops9g00839 9 13004618 13007894 ECH
Rops11g03971 11 73890721 73895667 Rops9g00839 9 13004618 13007894 PCT