Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03971 ATGAAAACTGCTATGTATACTATATGTATGTTTGTAATGCTTCTGTATAATGCAATACTGTATTGCTGCTGCTTTGGTGCAAGCCACCATCTTCTCACTCCTAACTTTAAGTCCAAGTTTCTTGCAACTGCATTGTGTACGAGAAACAGAGTCATGGGTAGGTTATTTGTGGTCAATTTGGAGGGGAAGATCTATAGCTGCAAACACTGCCGTACCCATCTTGCGTTATACGAAGACATAGTCTCCAAGACTTTCCACTGCAGACACGGGAAAGCTTATCTCTTCAATAAGGTTGTGAATGTTTCTCTTGGTGAAAAAGAGGAGAGACCGATGATGACTGGGTTACATACTGTGGCTGACATATTCTGTGTGGGTTGTGGATCGATTGTGGGTTGGAAATATGAGACTGCTCATGAAAAAGGCCAGAAGTACAAGGAAGGAAAATCTGTGCTTGAACGGTACAAGGTGTCAGGTCCTGATGGAAGCAATTATTGGATCAGCCATGAAGCACATGTTGCTGGAAGTGATGCAGATGATGCTTAG 543 0.4254 MKTAMYTICMFVMLLYNAILYCCCFGASHHLLTPNFKSKFLATALCTRNRVMGRLFVVNLEGKIYSCKHCRTHLALYEDIVSKTFHCRHGKAYLFNKVVNVSLGEKEERPMMTGLHTVADIFCVGCGSIVGWKYETAHEKGQKYKEGKSVLERYKVSGPDGSNYWISHEAHVAGSDADDA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03971 180 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 52 157 IPR039058 -
Rops11g03971 180 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 64 157 IPR004910 -
Rops11g03971 180 ProSiteProfiles Yippee domain profile. 63 160 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03971 Rops-Chr11 73890721 73895667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03971 - - cave:132186808 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03971 11 73890721 73895667 Rops11g03971 11 73890721 73895667 ECH
Rops11g03971 11 73890721 73895667 Rops9g00839 9 13004618 13007894 ECH
Rops11g03971 11 73890721 73895667 Rops9g00839 9 13004618 13007894 PCT