Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00834 ATGGGCACATATACCTACAATTACAAAATGTTCAAGTGCTTCAACAGAAAATTCTCCTTCTCCGAACAGGCACCACCGCCCGACGTCAAGCAAGCATTTTCAGACTTCGCCGACGGCGGAATCTCCATGTCCGTCGACCAGTTCCTGCATTTCATGGTGGAACACCAAGGCGAATCGGACTGCACCGTAGAGGATTCGAAACGGATAATCGAGAACATTTTGCAATCGCGGAAACAGATTCCGGAAAAAGACACTTCAAACTGCAGCGGAATCACACTCGACGAGTTCTTCCATTTCTTGTGCCTCGTTGATTTCAACGGCCCCTTGAAATATCAGGTACATCATGATATGAATGCACCATTATCACATTATTTCATATATACTGGGCACAATTCCTACCTGACTGGGAATCAACTGAGCAGCGATTGCAGTGATAAGCCAATCATAAAGGCTTTGCAACGGGGTGTACGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGACATTGATGTAGTTCATGGAAGGACACTTACCGCTCCTGTCTCACTTAAACAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCGTTACCCACTCATCATAACTTTAGAAGATCACCTTACACCAGATCTTCAAGCTAAAGTTGCAGAGATGACAGCTCAAACATTTGGAGATATGCTCTATTATCCTCATACAGATCCTCTGAGAGAATTCCCCACACCAGAATCACTGAAAGATCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCAATTTAAGGATAATGACAGTGAAAGGGAATCGGCAGATGAAGGATCATCATCGCCAGGCCTTATTACTGAAGTTGAAGCTGGTTACAGGTGCCATGGAAGTGATGCCGATGAGGAAGGTCTGAGTGCACGTGATAAAAAACCAGACCAGCAGGGTGCACCTGAGTACAAACGTTTGATTACAATCCATGCTGGGAAACCGAAGGGTCATGTAAAGGACAACCTAAAAATTGACGGGGATGTTAAGCGCTTGAGCTTGAGCGAACAGGAACTTGAAAAGGCTTCTGTCTCTTACGGAGCTGATATTGTTAGGTACACACAGAAGAATATTATCAGGGTGTATCCGAAGGGAACACGTGTCACCTCCTCAAATTACAGGCCACATATAGGGTGGATGTACGGAGCTCAGATGGTCGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTATATGCAAGGGATGTTTAGAGCAAATGGAGGGTGTGGTTATGTGAAAAAGCCTGCGTTTATGATTGAAAAAGGCCCAAATAATGAGGTTTTTGATCCTAAAAGAACATTGCCAGTGAAGAAGACATTAAAGGTGAAAGTATATATGGGAAACGGGTGGAGCTCAGATTTTAGCAAAACACACTTTGATACGTTCTCTCCACCGGACTTTTACACAAAGGTTTGTATTGTTGGAGTACCAGCTGATAAAGTCAATAAGAAGACCAAGGTAATTCAAGACAATTGGTTTCCCATCTGGGACGAAGAGTTTGATTTTCCTTTGACCGTTCCAGAGCTTGCTCTGCTTCGAATAGAAGTTCGAGAGTATGATAAACATGAAAAGGATGACTTTGGAGGACAAACATGTTTGCCAGTCTCTGAGCTGAGATCTGGGTTCAGGGCAGTCCCTCTATATAATCAGAAGGGCGATAAATTAAACTCTGTAAAGCTTTTAATGCGGTTTCAGTTTAGATGA 1767 0.4256 MGTYTYNYKMFKCFNRKFSFSEQAPPPDVKQAFSDFADGGISMSVDQFLHFMVEHQGESDCTVEDSKRIIENILQSRKQIPEKDTSNCSGITLDEFFHFLCLVDFNGPLKYQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDKPIIKALQRGVRVIELDLWPNSTKDDIDVVHGRTLTAPVSLKQCLKSIKEYAFVKSRYPLIITLEDHLTPDLQAKVAEMTAQTFGDMLYYPHTDPLREFPTPESLKDRILISTKPPKEYLESKQFKDNDSERESADEGSSSPGLITEVEAGYRCHGSDADEEGLSARDKKPDQQGAPEYKRLITIHAGKPKGHVKDNLKIDGDVKRLSLSEQELEKASVSYGADIVRYTQKNIIRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPAFMIEKGPNNEVFDPKRTLPVKKTLKVKVYMGNGWSSDFSKTHFDTFSPPDFYTKVCIVGVPADKVNKKTKVIQDNWFPIWDEEFDFPLTVPELALLRIEVREYDKHEKDDFGGQTCLPVSELRSGFRAVPLYNQKGDKLNSVKLLMRFQFR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00834 588 SUPERFAMILY EF-hand 7 117 IPR011992 -
Rops9g00834 588 Gene3D - 23 106 - -
Rops9g00834 588 SMART C2_3c 460 568 IPR000008 -
Rops9g00834 588 FunFam Phosphoinositide phospholipase C 455 588 - -
Rops9g00834 588 Pfam C2 domain 460 563 IPR000008 -
Rops9g00834 588 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 460 587 IPR035892 -
Rops9g00834 588 CDD C2_PLC_like 458 588 - -
Rops9g00834 588 SMART plcy_3 324 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops9g00834 588 SMART plcx_3 115 259 IPR000909 -
Rops9g00834 588 SUPERFAMILY PLC-like phosphodiesterases 115 441 IPR017946 GO:0006629|GO:0008081
Rops9g00834 588 MobiDBLite consensus disorder prediction 265 321 - -
Rops9g00834 588 Pfam Phosphoinositide-specific phospholipase C, efhand-like 28 103 IPR015359 -
Rops9g00834 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 353 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops9g00834 588 CDD PI-PLCc_plant 114 427 - -
Rops9g00834 588 Gene3D Phosphatidylinositol (PI) phosphodiesterase 112 452 IPR017946 GO:0006629|GO:0008081
Rops9g00834 588 MobiDBLite consensus disorder prediction 298 321 - -
Rops9g00834 588 ProSiteProfiles C2 domain profile. 441 570 IPR000008 -
Rops9g00834 588 MobiDBLite consensus disorder prediction 265 281 - -
Rops9g00834 588 Gene3D C2 domain 455 588 IPR035892 -
Rops9g00834 588 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 10 587 IPR001192 GO:0035556
Rops9g00834 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 115 259 - -
Rops9g00834 588 PRINTS Phospholipase C signature 554 564 IPR001192 GO:0035556
Rops9g00834 588 PRINTS Phospholipase C signature 146 166 IPR001192 GO:0035556
Rops9g00834 588 PRINTS Phospholipase C signature 243 260 IPR001192 GO:0035556
Rops9g00834 588 PRINTS Phospholipase C signature 378 399 IPR001192 GO:0035556
Rops9g00834 588 PRINTS Phospholipase C signature 399 417 IPR001192 GO:0035556
Rops9g00834 588 PRINTS Phospholipase C signature 120 138 IPR001192 GO:0035556
Rops9g00834 588 Pfam Phosphatidylinositol-specific phospholipase C, X domain 117 259 IPR000909 -
Rops9g00834 588 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 352 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00834 Rops-Chr9 12901880 12908411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00834 5 587 Acyl Lipid Metabolism Gene Families AT2G40116 60.791 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00834 K05857 - gmx:100777010 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03957 11 73752552 73757405 Rops9g00834 9 12901880 12908411 ECH
Rops9g00834 9 12901880 12908411 Rops9g00834 9 12901880 12908411 ECH
Rops11g03957 11 73752552 73757405 Rops9g00834 9 12901880 12908411 PCT