Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03957 ATGACCACCCACAACTATCAAATCCTTAACTGCTTCAACAGAAAGTTCACCCTCACCGAATCAGGCCCACCGCCCGACGTCCAACGTGCCTTCTCCGATTTCTCCGCCGGCGCACCCTCCATGTCCGCCGATCACCTCTGCCGATTCCTGCTGGAGCATCAGGGCCAACTGGACTGCACCCCATCGGATTCCGAACGGATCCTCTCGCAATTGCAGGAACAGAAACAGGATCACAAAACCACCGATTCCGGTGGACTCAACCTCCACCACTTCTTCCATTTCTTGTTCCACCATGATTTCAATCCCCCCATGAAATCTCAGGTACATCATAACATGAATGCTCCATTGTCACATTATTTTATATATACTGGGCACAATTCCTATCTGACTGGGAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGATATCGTTGTAGTTCATGGAAGGACTCTTACCACTGCTGTCTCACTTATACAATGTCTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCCCTACCCAGTCATTATAACTTTCGAAGATCACCTTACTCCAGATCTTCAAGCTAAAGTTGCAGAGATGGCAACTCAAGTATTTGGAGAATTGCTTTATTATCCTCAGACAGATACTCTGTCAGAGTTCCCCACACCAGAATCATTGAAAGGTCGAATTCTTATATCGACCAAACCACCGAAAGAATATCTTGATGACAAGCAATGTCTTGATGACAAGGACAATGAAAAGGAAATAGCTGACGAAGGATCATCATCGCCAGACCTTAGTAATGAACTAGAACCTGATGACAGGCAGTGTGCACCTGAGTATAAAAGCTTGATTACAATCCGTGCTGGGAAACCGAAGGGCGATTTACAAGATGAATTAAAAGCTGTTGGTGAAGTTAGGCGCTTAAGCTTGAGCGAACAGGCACTTGAAAAGGCTGCTGACTCTTACGGAGCTGATATTGTTAGGTTTACACAGAAGAATATTCTTAGAGTGTATCCAAAGGGAACACGCCTCAACTCCTCAAATTACAAGCCACACATAGGGTGGATGTACGGAGCTCAGATGGTTGCATTTAACATGCAGGGATATGGCAAATTACTGTGGTTCATGCAAGGGATGTTCAGAGCAAATGGAGGGTGTGGTTATGTGAAAAAACCTGATTTTCTAATTCTAAAAGGTCCACATAATGAGGTTTTTGATCCTAAAAGAACATTGCCAGTGAAGATAACATTAACGGTAAAAGTCTATATGGGGAACGGTTGGTGCTCGGATTTTAGCCCAACTCACTTTGATACCTACTCACCACCAGACTTTTACGCAAAGGTTGGTATTGTTGGGGTTCCTGCTGATATGGCCAAGAAGAAAACAAGGGTCATTTCAAATAATTGGTTTCCTGTCTGGGACGAAGAATTTGATTTCCCTTTGACTGTTCCAGAGCTGGCTTTGCTCCGTATACAAGTTAAAGACAATGATAAGCATCAAAAGGATGACTTTAGTGGACAGACGTGTTTGCCAGTCTCGGAGCTCAAATCTGGATTTCGATCAGTCCCTCTGTATGATGAAAAGGGCGAGAAATTAAAATCTGTGAAGCTTTTCATGCGGTTTCGGTTTAGATGA 1695 0.4348 MTTHNYQILNCFNRKFTLTESGPPPDVQRAFSDFSAGAPSMSADHLCRFLLEHQGQLDCTPSDSERILSQLQEQKQDHKTTDSGGLNLHHFFHFLFHHDFNPPMKSQVHHNMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTKDDIVVVHGRTLTTAVSLIQCLKSIKEYAFVKSPYPVIITFEDHLTPDLQAKVAEMATQVFGELLYYPQTDTLSEFPTPESLKGRILISTKPPKEYLDDKQCLDDKDNEKEIADEGSSSPDLSNELEPDDRQCAPEYKSLITIRAGKPKGDLQDELKAVGEVRRLSLSEQALEKAADSYGADIVRFTQKNILRVYPKGTRLNSSNYKPHIGWMYGAQMVAFNMQGYGKLLWFMQGMFRANGGCGYVKKPDFLILKGPHNEVFDPKRTLPVKITLTVKVYMGNGWCSDFSPTHFDTYSPPDFYAKVGIVGVPADMAKKKTRVISNNWFPVWDEEFDFPLTVPELALLRIQVKDNDKHQKDDFSGQTCLPVSELKSGFRSVPLYDEKGEKLKSVKLFMRFRFR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03957 564 FunFam Phosphoinositide phospholipase C 107 429 - -
Rops11g03957 564 ProSiteProfiles C2 domain profile. 417 546 IPR000008 -
Rops11g03957 564 FunFam Phosphoinositide phospholipase C 431 564 - -
Rops11g03957 564 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 328 414 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops11g03957 564 CDD C2_PLC_like 434 564 - -
Rops11g03957 564 Gene3D Phosphatidylinositol (PI) phosphodiesterase 107 428 IPR017946 GO:0006629|GO:0008081
Rops11g03957 564 SMART C2_3c 436 544 IPR000008 -
Rops11g03957 564 FunFam Phosphoinositide phospholipase C 22 106 - -
Rops11g03957 564 SUPERFAMILY PLC-like phosphodiesterases 110 416 IPR017946 GO:0006629|GO:0008081
Rops11g03957 564 SMART plcy_3 300 416 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops11g03957 564 Gene3D C2 domain 431 564 IPR035892 -
Rops11g03957 564 SMART plcx_3 110 254 IPR000909 -
Rops11g03957 564 Pfam C2 domain 437 538 IPR000008 -
Rops11g03957 564 Gene3D - 23 104 - -
Rops11g03957 564 CDD PI-PLCc_plant 109 403 - -
Rops11g03957 564 PRINTS Phospholipase C signature 238 255 IPR001192 GO:0035556
Rops11g03957 564 PRINTS Phospholipase C signature 115 133 IPR001192 GO:0035556
Rops11g03957 564 PRINTS Phospholipase C signature 530 540 IPR001192 GO:0035556
Rops11g03957 564 PRINTS Phospholipase C signature 141 161 IPR001192 GO:0035556
Rops11g03957 564 PRINTS Phospholipase C signature 375 393 IPR001192 GO:0035556
Rops11g03957 564 PRINTS Phospholipase C signature 354 375 IPR001192 GO:0035556
Rops11g03957 564 MobiDBLite consensus disorder prediction 272 293 - -
Rops11g03957 564 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 10 563 IPR001192 GO:0035556
Rops11g03957 564 Pfam Phosphatidylinositol-specific phospholipase C, X domain 112 254 IPR000909 -
Rops11g03957 564 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 110 254 - -
Rops11g03957 564 SUPERFAMILY EF-hand 17 111 IPR011992 -
Rops11g03957 564 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 436 563 IPR035892 -
Rops11g03957 564 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 329 415 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03957 Rops-Chr11 73752552 73757405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03957 3 563 Acyl Lipid Metabolism Gene Families AT2G40116 59.900 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03957 K05857 - gmx:100799027 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03957 11 73752552 73757405 Rops9g00834 9 12901880 12908411 ECH
Rops11g03957 11 73752552 73757405 Rops11g03957 11 73752552 73757405 ECH
Rops11g03957 11 73752552 73757405 Rops9g00834 9 12901880 12908411 PCT