Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00803 ATGGCAAATTTAGTTGAAGATTTCTTCAAGGAGAGAAAATACCCATTCATTTTCACTCTCTTGGTGTTGCTCATTTGCGTAACGCTCCTCCTCTTCACCAACACCACCATCACCAACCCCCTCGTTTACTATTCTAATGTAAAAGAAGAATCACCCCTCAACCCTTCCCCTCTACCTGCAGATTCTACTACAAATCCAAAAGAGCAAAAGCTACCCCCAAACGTGACCAATATCGCGGCCCCAAAAGACCAAGGATTTCCTCAAAAGGAAGAGGCTCTTGGTAATGTGAGTATTGATTGGAAGCTGTGTAAGAAACCGGTGACAGTTGATTACATACCCTGTTTGGATAATTTTGAGGCGATTAAGGCTTTGAAGTCAAGGAGACACATGGAGCATAGGGAAAGGCATTGTCCTGAAACTAGTCTTCACTGTTTGTTGCCCCTCCCCAAAGGGTATAAAGTCCCGGTTCCGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTTATCCAAAGCTAGTTGAGTACAAGAAGGACCAACACTGGGTTGTGAAGTCTGGTGAATATCTCGTCTTTCCGGGAGGTGGTACTCAATTCAAAGATGGAGTTGATCATTATATTGAGTTCATAGAGAAGGCATTACCAGCAATTCAATGGGGAAAGCATATCAGGGTTGTTCTAGATGTTGGTTGTGGTGTTGCTAGCTTTGGTGGCTATCTGCTGGACAAAAAAGTTATTACTATGTCATTTGCCCCAAAGGATGAACATGAAGCTCAGATACAGTTTGCTTTGGAGCGAGGAATTCCCGCTACTCTCTCTGTCATTGGAACACAAAAGTTGACTTTTCCTGACAATGGTTTTGACTTGATCCACTGTGCAAGATGCAGGGTTCATTGGGATGCAGATGGTGGGAAACCGTTGTATGAACTCAACAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCAACACCAGTTTATCGTGATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGACTATAACAAAAGCTATGTGCTGGAAGGTTGTGGCTAAAGCTCATGATTCATCTGGAATTGGGCTTGTTATATACCACAAGCCTACCTCATCTTCTTGCTATGAGAAACGTGTAGAGAATAATCCACCTTTATGTGAAAATATAGATGGGAAAAATAGCTCATGGTATGCCAGACTCAGTAGTTGCCTTACTCCTCTTCCGGTTGATGGCATGGGTAACATGCAGAGCTGGCCCATGCCTTGGCCTCAGAGGCTTACCAGTAAGCCCCCTAGCTTACCCACTGATTCAGATGCCATTGATAAGTTCTACAAGGACACCAAACGCTGGTCTGAACTAGTGTCAGATGTTTATGCCGACGGTCTTTCTATAAACTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCAGCAGCTCTCATTGATCAACCAATCTGGGTGATGAATGTAGTGCCAATTGATGTGCCAGATACTCTTTCTATTATATTGGACAGAGGATTAATAGGAATGTATCATGATTGGTGCGAATCCTTTAATACCTATCCTCGCACATATGATCTCCTTCATGCCAGCTTTCTTTTCAAATATCTTGAGCAAAGATGTGACGTTGTAGATGTGGTTGTGGAGATAGATCGCATATTGAGACCAGATGGATATCTTGTGGTTCAAGATACCTTGGAAATACTTAGCAAGCTCACTCCAATCTTGCGTTCACTTCACTGGTCTGTAACGTTGCATCAAAATCAGTTTCTTGTTGCTAGGAAGAGTTTCTGGCGACCAACGAGCTTTCAAAACTGA 1845 0.4309 MANLVEDFFKERKYPFIFTLLVLLICVTLLLFTNTTITNPLVYYSNVKEESPLNPSPLPADSTTNPKEQKLPPNVTNIAAPKDQGFPQKEEALGNVSIDWKLCKKPVTVDYIPCLDNFEAIKALKSRRHMEHRERHCPETSLHCLLPLPKGYKVPVPWPKSRDMIWYDNVPYPKLVEYKKDQHWVVKSGEYLVFPGGGTQFKDGVDHYIEFIEKALPAIQWGKHIRVVLDVGCGVASFGGYLLDKKVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLYELNRILRPGGFFAWSATPVYRDDERDQKVWNAMVTITKAMCWKVVAKAHDSSGIGLVIYHKPTSSSCYEKRVENNPPLCENIDGKNSSWYARLSSCLTPLPVDGMGNMQSWPMPWPQRLTSKPPSLPTDSDAIDKFYKDTKRWSELVSDVYADGLSINWSSVRNVMDMNAGYAGFAAALIDQPIWVMNVVPIDVPDTLSIILDRGLIGMYHDWCESFNTYPRTYDLLHASFLFKYLEQRCDVVDVVVEIDRILRPDGYLVVQDTLEILSKLTPILRSLHWSVTLHQNQFLVARKSFWRPTSFQN* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00803 614 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 110 598 IPR004159 GO:0008168
Rops9g00803 614 Gene3D Vaccinia Virus protein VP39 189 358 IPR029063 -
Rops9g00803 614 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 608 IPR004159 GO:0008168
Rops9g00803 614 Gene3D Vaccinia Virus protein VP39 435 604 IPR029063 -
Rops9g00803 614 CDD AdoMet_MTases 228 322 - -
Rops9g00803 614 MobiDBLite consensus disorder prediction 49 72 - -
Rops9g00803 614 FunFam probable methyltransferase PMT23 200 383 - -
Rops9g00803 614 MobiDBLite consensus disorder prediction 49 73 - -
Rops9g00803 614 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 343 IPR029063 -
Rops9g00803 614 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 457 588 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00803 Rops-Chr9 12461954 12470065 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00803 - - gmx:100800390 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00803 9 12461954 12470065 Rops9g00803 9 12461954 12470065 ECH
Rops11g03929 11 73425770 73429444 Rops9g00803 9 12461954 12470065 PCT