Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03929 ATGATCCTCCTCTTCTCTAAAACCACTTTCACCATTGATTCAATTGGCTTCTACCCAGATGATGTCAAGGCTCAACCACTCGATTACCATGCCCCTTCTTCCCTCACAGATTCTTCCGGAAGTCCCAAAGACCAAGAACTACCCCGAAACTTGACCAAGATCACAGCCTCAAAAGACCAAGGATTGCTCCAGAGAGAAGAGATTTTAGATGGTGTGAATATCCATTGGAAGCTTTGTAAGGGTAAGGTGAAGATAGATTATATACCTTGTTTAGATAATCTTAAGGCCATTAAGGCTTTGAGGTCAAGGAGGCACATGGAGCACAGGGAAAGGCATTGTCCTCATTCTAGTCTACAATGTTTGCTGCCTCTTCCCAAAGGGTACAAAGTCCCGGTTCCGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTCATCCAAAGCTTGTTGAATACAAGAAGGAGCAAAACTGGGTGGTGAAGTCAGGCGAATATCTTGTCTTTCCAGGAGGTGGTACTCAATTCAAAGAAGGAGTTAACCATTATACTCAGTTCATAGAGAAGACACTACCAGCAATTCAATGGGGAAAGAATATCAGGGTTGCTCTTGATGTTGGCTGTGGAGTTGCTAGCTTTGGTGGCTATCTTCTGGACAAAAATGTTATTACTATGTCGTTTGCACCAAAGGATGAGCATGAAGCTCAGATACAGTTTGCTTTGGAACGAGGAATTCCTGCAACTCTTTCTGTCATTGGAAGACAAAAATTGACATTTCCTGACAATGGATTTGATTTGATCCATTGTGCACGATGCAGGGTGCATTGGGATGCAGATGGTGGGAAACCGTTATTTGAGCTCAATAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCAACACCAGTTTATCGAGATGATGAAAGAGACAAGAAAGTATGGAAAGCCATGGTGACTGTAACAAACGCAATGTGCTGGACTGTTGTGGCTAAGACTTTTGATTCATCTAGAATTGGGCTTGTTATATACCAGAAGCCTACCTCATCTTCCTGTTATGAGAAACGCAAAGAGAACAACCCTCCTTTATGTGAAAATCACCAAAGGAAAAATAGCTCATGGTATGCTAGACTCAGTGGCTGCCTTAGTCCACTTCCAGTGGATGATGTGGGTAACGTGCAGGGCTGGCCCATGCCTTGGCCCCAGAGGCTTACTAGCATGCCTCCTAGCTTATCTACTGAATCAGATGCCAAAGAGATGTTCTACAAGGACACCAAACACTGGTCTGAACTAGTTTCAGAGGTTTATGTGGATGGTCTTTCTATTAATTGGTCAAATGTTCGAAATATCATGGACATGAATGCCGGTTTTGCAGGATTTGCGGCAGCACTAATTGATCTACCAGTGTGGGTGATGAATGTAGTACCCATTGACATGCCAGATACTCTTTCTATTATATTTGACAGAGGTTTAATAGGAATGTACCATGATTGGTGCGAGTCCTTTAATACCTACCCTCGTACATATGACCTTGTTCATTCTACCTTTCTCTTCAAAAACCTTGACCAAAGATGTGACATTGTAGATGTGGTTGTGGAGATAGATCGCATTTTGAGACCAGATGGGTATCTATTGGTTCAAGACTCGATGGAAATAATAAGAAAGGTGGGTCCAATCTTGCGTTCACTTCATTGGTCTGTAACATTGTATCAAAATCGGTTTCTTGTTGGTAGGAAGAGCTTCTGGCGTCCAAGGCCTTAG 1764 0.4297 MILLFSKTTFTIDSIGFYPDDVKAQPLDYHAPSSLTDSSGSPKDQELPRNLTKITASKDQGLLQREEILDGVNIHWKLCKGKVKIDYIPCLDNLKAIKALRSRRHMEHRERHCPHSSLQCLLPLPKGYKVPVPWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKSGEYLVFPGGGTQFKEGVNHYTQFIEKTLPAIQWGKNIRVALDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGRQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDKKVWKAMVTVTNAMCWTVVAKTFDSSRIGLVIYQKPTSSSCYEKRKENNPPLCENHQRKNSSWYARLSGCLSPLPVDDVGNVQGWPMPWPQRLTSMPPSLSTESDAKEMFYKDTKHWSELVSEVYVDGLSINWSNVRNIMDMNAGFAGFAAALIDLPVWVMNVVPIDMPDTLSIIFDRGLIGMYHDWCESFNTYPRTYDLVHSTFLFKNLDQRCDIVDVVVEIDRILRPDGYLLVQDSMEIIRKVGPILRSLHWSVTLYQNRFLVGRKSFWRPRP* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03929 587 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 318 IPR029063 -
Rops11g03929 587 CDD AdoMet_MTases 205 298 - -
Rops11g03929 587 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 60 584 IPR004159 GO:0008168
Rops11g03929 587 Gene3D Vaccinia Virus protein VP39 176 370 IPR029063 -
Rops11g03929 587 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 86 573 IPR004159 GO:0008168
Rops11g03929 587 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 347 553 IPR029063 -
Rops11g03929 587 FunFam probable methyltransferase PMT23 176 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03929 Rops-Chr11 73425770 73429444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03929 - - gmx:100808221 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03929 11 73425770 73429444 Rops11g03929 11 73425770 73429444 ECH
Rops11g03929 11 73425770 73429444 Rops9g00803 9 12461954 12470065 PCT