Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00775 ATGGTTTCTGTTGATAATGGTAAAGATGAAATTGAGGAATGTAATGGAAGTAAAGAAAAGGGGTTTGCTTCCATAGATATTTCAACTTCTGGAAGAACATTGCTGAGCAGTGAAAATCCTCAGAGAAAGTTCAATGGCACCTTGAGTTCTATTCCAAATAGGATCAACTTCTGGAAATTTGGTTCTGCATCTGCAAAATTCAAGCGGCTTGCTACTCAGAGGGACCAATTTTCACAGGCTGTGCCTTCTCCTAGTTCACATAGCTTAAGAGAACGTTTCAGTGGCATGTTTGCTAAGAAACTTGACTGGGGTTCAATCAAGAAGATGTGTGTAGAATGGTTTAGGAACCCAATGAACGTTGCCCTTTTTGTGTGGATATTCTGTGTTGCTGTTTCAGGTGCAATTCTGTTCCTTGTCATGACTGGCATGTTGAATGGTGTGCTGCCAAAGAAGTCCCAGAGGAATGCATGGTTTGAAGTAAACAATCAAATACTGAATGCACTGTTTACACTAATGTGTTTGTACAACCATCCAAAGAGGTTCTACCACCTTGTTCTTCTGTGCAGATGGAGTCCAAAGGATATCTCCAGACTTAGAAAGGTGTACTGCAAGAATGGTACTTATAAGCCCCAGGAATGGGCACACATGATGGTAGTGATCACTCTCCTTCATGTGAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAATTGGGGGTATAAAAGATCTGAGCGTCCAGCCATAGGAGTTGGAATATGTATATCTTTTGCAATTGCCGCACCTGCAATTGCTGGTCTATATACCATTCTCAGTCCACTAGGTAGAGATTATGATTCTGATATGGATGAAGAAGCACAGGTTCAAATTTCTGTTGCTCAAAAGCAAGAGCAGCTGAGAGTGAAATCATTAGAGAAGAGATACTCATTTGCATCCAGAAATCAACAAAAGATTATTGAAAATAGACCACAGTGGAGCGGAGGAATACTTGACATTTGGAATGATATTTCTCAGGCATATCTATCACTTTTCTGTACTTTTTGTGTCTTTGGTTGGAATATGGAGAGACTTGGCTTTGGAAATATGTATGTTCATATTGCCACTTTTATGCTGTTTTGTATGGCTCCCTTCTGGATTTTTATCTTGGCTGCTGTTAATATTGAGGATGACACTGTTAGGCAAGCTCTAGTAGCTACTGGGATCATTCTATGTTTTTTTGGTTTACTGTATGGTGGCTTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTGCCTGCTTATGACTTCTGTTTTGGCAAGCATTCAGCTTCTGATTGCACACTTTGGCTATGCTGTTGTTGGTGCTCTCTTGCTCAAGAAGTAAGGACAGGGAATACCTATGATATTGTTGAAGAAAAATTTTGCAGGAAAGAAAATAATACTGGTGACCAATTTCCAATTTCACCTTTGCCTCGTGAAGATGTGGCATCAACAAAATTTGGCACAAGTTCCCCCCTTGGTATAAACTCTTCCCCTTCTATAATCAAACCATCTCGTCCATTATCTACACTTAAAGAAGAGCTTCCTGAAAGAGGTAAAGATGGGATAATGAGTCCCCCAACTCCACCATTGATTCAAAGAGAATCTCCTTAG 1629 0.4002 MVSVDNGKDEIEECNGSKEKGFASIDISTSGRTLLSSENPQRKFNGTLSSIPNRINFWKFGSASAKFKRLATQRDQFSQAVPSPSSHSLRERFSGMFAKKLDWGSIKKMCVEWFRNPMNVALFVWIFCVAVSGAILFLVMTGMLNGVLPKKSQRNAWFEVNNQILNALFTLMCLYNHPKRFYHLVLLCRWSPKDISRLRKVYCKNGTYKPQEWAHMMVVITLLHVNCFAQYALCGLNWGYKRSERPAIGVGICISFAIAAPAIAGLYTILSPLGRDYDSDMDEEAQVQISVAQKQEQLRVKSLEKRYSFASRNQQKIIENRPQWSGGILDIWNDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVATGIILCFFGLLYGGFWRIQMRKRFNLPAYDFCFGKHSASDCTLWLCCCWCSLAQEVRTGNTYDIVEEKFCRKENNTGDQFPISPLPREDVASTKFGTSSPLGINSSPSIIKPSRPLSTLKEELPERGKDGIMSPPTPPLIQRESP* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00775 542 Pfam PLAC8 family 324 454 IPR006461 -
Rops9g00775 542 NCBIfam uncharacterized Cys-rich domain 323 455 IPR006461 -
Rops9g00775 542 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Rops9g00775 542 PANTHER PLAC8 FAMILY PROTEIN-RELATED 4 540 - -
Rops9g00775 542 MobiDBLite consensus disorder prediction 492 510 - -
Rops9g00775 542 MobiDBLite consensus disorder prediction 492 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00775 Rops-Chr9 12220357 12223045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00775 - - gmx:100795088 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03895 11 72919382 72922269 Rops9g00775 9 12220357 12223045 ECH
Rops9g00775 9 12220357 12223045 Rops9g00775 9 12220357 12223045 ECH
Rops11g03895 11 72919382 72922269 Rops9g00775 9 12220357 12223045 PCT