Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03895 ATGGTTTCAGTTGATAATGGTATTGAGAATCCCAAACATGAAATTGAAGAATCTAATGGGAGTCAAGTGATGGAGTTTGCTACTGTGAAAGACCAGATTTCACAATCTGTGCCTTCTCCTCGTTCAAATAGCCGAAGAGCACGTTTCAGTAGCATGTTTGCTCGGAAACTTAACCGGGGTTTAGTCAAGAAGATGTGCATGGAATGGATTAGGAACCCAATGAACATGGCCATTTTTGTGTGGATCACTTGTGTTAGTGTTTCAGGTGCAATTCTGTTCCTTGTCATGACAGGCATGTTGAATGGAGTGCTCACAAGTAAGTCTGAGAGGAACACATGGTTTGAAGTAAATAACCAAATACTCAATGCATTGTTTACACTTATGTGTTTGTACCAACATCCAAAGAGGTTCCACCACCTTGTTCTTCTATGCAGATGTAGACCAAATGACATCTCTAGACTTAGAAAGGTATACTGCAAGAATGGCACTAATAAACCCCATGAATGGGCACATATGATGGTAGTGATCATTCTCCTTCATGTGAATTGTTTTGCTCAATATGCAGTTTGTAGTCTAAACTTGGGGTATAAAAGGTCTGAGAGACCTGCCATTGGAGTTGGAATATGTATATCTTTTGCAATTGCTGCACCTGCAATAGCTGGCCTGTACACTATTCTTAGCCCACTTGGGAGGGACTATGATTGTGAAATGGATGAAGAAGCACAGGTTCAAATTACTGCTTCTCAAAGGCAAGAGCAGCCAAGTGAGAAGAAATATTCATTTGCATCCAAAGATCAACAGAGAATCATTGAAGATAGACCAAAGTGGAGTGGAGGAATACTTGACATTTGGAATGATATTTCTTTAGCATATCTCTCACTTTTCTGTACTTTCTGTGTCTTTGGGTGGAATATGGAGAGACTTGGCTTTGGAAACATGTATGTTCATATTGCTACTTTTATGCTGTTCTGTGTGGCTCCTTTCTGGATTTTTATATTGGCTTCCGTTAATATTGATGATGACAATATTAGACAGGCTCTAGCAGCTGTTGGAATTATTCTTTGTTTTGTTGGTTTGCTCTACGGTGGCTTTTGGAGGATTCAAATGAGAAAGAGGTTCAATTTACCTGCCTATGACTTCTGTTTTGGCAAACCTTCAGTTTCTGATTGCACACTTTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGCAAGGACTGGGAATAACTATGATCTTGTGGAAGATAAATTCTGCAGGAAAGAAATTGATACTGGTGATGAACCATCAATTTCACCTTTGGCTAGGGAAGATGTAGTATCAACCAAATCAGTCACAAGTTCTCCTGTGGGTAACAACTCTTCCCCTTCTATCATTCCAACATCTAGTCCTCTAAGCTCAAGCAATCCCTTAAAGGGATATTACAGTCCAGATAGGCCTCTATCTAATGTAAAAGAAGAGCATTTTGAAAGAGGCAAAGATGGAATAATGAACCCACCAACTCCATCATTAATACAAAGAGAAGCTCCTTAG 1533 0.3986 MVSVDNGIENPKHEIEESNGSQVMEFATVKDQISQSVPSPRSNSRRARFSSMFARKLNRGLVKKMCMEWIRNPMNMAIFVWITCVSVSGAILFLVMTGMLNGVLTSKSERNTWFEVNNQILNALFTLMCLYQHPKRFHHLVLLCRCRPNDISRLRKVYCKNGTNKPHEWAHMMVVIILLHVNCFAQYAVCSLNLGYKRSERPAIGVGICISFAIAAPAIAGLYTILSPLGRDYDCEMDEEAQVQITASQRQEQPSEKKYSFASKDQQRIIEDRPKWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCVAPFWIFILASVNIDDDNIRQALAAVGIILCFVGLLYGGFWRIQMRKRFNLPAYDFCFGKPSVSDCTLWLCCCWCSLAQEARTGNNYDLVEDKFCRKEIDTGDEPSISPLAREDVVSTKSVTSSPVGNNSSPSIIPTSSPLSSSNPLKGYYSPDRPLSNVKEEHFERGKDGIMNPPTPSLIQREAP* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03895 510 PANTHER PLAC8 FAMILY PROTEIN-RELATED 21 508 - -
Rops11g03895 510 MobiDBLite consensus disorder prediction 430 510 - -
Rops11g03895 510 Pfam Protein of unknown function (DUF2985) 68 145 IPR021369 -
Rops11g03895 510 MobiDBLite consensus disorder prediction 437 473 - -
Rops11g03895 510 NCBIfam uncharacterized Cys-rich domain 275 407 IPR006461 -
Rops11g03895 510 Pfam PLAC8 family 276 406 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03895 Rops-Chr11 72919382 72922269 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03895 - - gmx:100811964 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03895 11 72919382 72922269 Rops9g00775 9 12220357 12223045 ECH
Rops11g03895 11 72919382 72922269 Rops11g03895 11 72919382 72922269 ECH
Rops11g03895 11 72919382 72922269 Rops9g00775 9 12220357 12223045 PCT