Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00293 ATGTTTCTCTATGTTTGGTGGAAGGAGAAACGAATTTCTTATGTTCTGTTTCTTCGGTGCAGGCTAGGTTGCTCTGGAACTTCAATGGCAGTGACAGAAGCTCAAAATCCTCTTCTTGGAGAAAACACCTGTGGTTCCTTGTTGAAGAAGCTGCAGGAAATATGGGATGAGGTTGGTGAGAGTGACGAGGAACGAGACAAGATGCTTCTGCAGTTAGAGCAGGAGTGCTTAGATGTGTACAAGAGAAAGGTAGAGCTGGCTACAAAGTCAAGGGCACAGCTACTTCAAGCCCTGTCTGATGCTAAGCTTGAGCTTTCTAGTCTTCTATCAGCTCTTGGAGAAAAGAGCTTTGATGGCATTCCCGATAATACTTCTGGAACCATCAAAGAACAGCTTGCAGCTATAGCACCGGTACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATAAAGGAGTTCTCAGATGTAGAGTCACAGATCCAAAAAATATGTGGAGAGATAACTGGGAACTTGAACCTTAGTGATGTTTCTCCTGCAGTTGACGAGTCTGACCTGTCCTTGAAGAAGTTTGATGAATATCAATCTGAGCTCCAAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCAAAAGGTTCTTGAATTTGTGAGTACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTCAGTACTGTAACTGAGGTTCATCCAAGCCTAAATGATTCTACTGGTGTTCAATCCAAAAGCATAAGCAATGACACCCTGGCTAGGCTGGCTAAGACAGTTTTAACACTGAAAGAAGATAAAAAACAGCGGCTGCACAAGCTCCAAGAATTAGCTTCTCAGTTAATTGATCTGTGGAATCTAATGGATACCCATCCAGAGGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAGCTTCTGTTGATGAAGTCACGGTTCCTGGGGCCCTAGCACTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAAGGAGAACTCGAAGAGATATTTGCCCGTGCTCATATAGAAATAGATCCAGAAGCTGCCCGAGAGAAGATTATGGCATTGATTGATTCTGGAAACATTGAACCAACTGAATTACTAGCTGACATGGACAATCAGATAGCAAAAGCGAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGTGCATGGGAAGAAGATCATGGCATGTCATTCACATATGATGGTGTTCCACTTCTTGCCATGCTAGATGAATATGCCATGCTCAGGCACGAAAGGGAAGAGGAAAAACGAAGGATGAGGGATCAGAAGAAGTATCATGAGCAGCAAAACACAGAACAGGAAGCAATCTTTGGTTCAAGACCAAGCCCTGCTAGACCAGTTAGTGCCAAGAAGGTAGGCCCTCGTGCTAATGGCGGAGCCAATGGCACTCCTAACCGACGGCTATCACTTAATGCTCATCAAAATGGAAGCAGGTCATCAAAAGATGGAAAAAGGGATAATACTAGACCAGTTGCTCCTGTGAATTATGTGGCCATAACAAAAGAAGATGCTGCTTCCCACGTTTCTGGTACTGAACCCGTCCCGGCATCACCCTAA 1830 0.4355 MFLYVWWKEKRISYVLFLRCRLGCSGTSMAVTEAQNPLLGENTCGSLLKKLQEIWDEVGESDEERDKMLLQLEQECLDVYKRKVELATKSRAQLLQALSDAKLELSSLLSALGEKSFDGIPDNTSGTIKEQLAAIAPVLEQLWQQKEERIKEFSDVESQIQKICGEITGNLNLSDVSPAVDESDLSLKKFDEYQSELQELQKEKSERLQKVLEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTHPEERRLFDHVTCNMSASVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQGELEEIFARAHIEIDPEAAREKIMALIDSGNIEPTELLADMDNQIAKAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEDHGMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKYHEQQNTEQEAIFGSRPSPARPVSAKKVGPRANGGANGTPNRRLSLNAHQNGSRSSKDGKRDNTRPVAPVNYVAITKEDAASHVSGTEPVPASP* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00293 609 Coils Coil 183 210 - -
Rops9g00293 609 Gene3D - 396 530 - -
Rops9g00293 609 Coils Coil 489 509 - -
Rops9g00293 609 Coils Coil 326 346 - -
Rops9g00293 609 MobiDBLite consensus disorder prediction 504 609 - -
Rops9g00293 609 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 41 595 IPR007145 GO:0000226|GO:0008017
Rops9g00293 609 Pfam Microtubule associated protein (MAP65/ASE1 family) 46 535 - -
Rops9g00293 609 FunFam 65-kDa microtubule-associated protein 6 397 530 - -
Rops9g00293 609 Coils Coil 267 287 - -
Rops9g00293 609 MobiDBLite consensus disorder prediction 504 521 - -
Rops9g00293 609 MobiDBLite consensus disorder prediction 553 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00293 Rops-Chr9 3646350 3651673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00293 41 579 EF-hand Containing Proteins AT5G62250 42.336 1.59e-122 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00293 K16732 - gmx:100810629 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00293 9 3646350 3651673 Rops9g00293 9 3646350 3651673 ECH
Rops11g02710 11 46661825 46671775 Rops9g00293 9 3646350 3651673 PCT