Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02710 ATGCTTCTCAAGGCTTCCATTATTTCAGATTTAACCAAATGTACCCCATCGCATCATCATGACTTGGCCGTGACAAGATCCAGTTGTTACATACTCTTGCTTTGTCAATGCAAGTTGTCAACTTGCTGCTACTGGATCTGCATTGTCCTTTTGAATATTAGGCTAGGTTGCACGGGAACTTCAATGGCAGTGACAGATGCTCAAAATCCTCTTCTCGGAGAAAACACATGTGGTTCCTTGTTAAATAAGCTGCAGGAAATATGGGATGAGGTTGGTGAGAGTGATGAGGAGCGAGACAAGATGCTTCTTCAGATAGATCAGGAGTGCTTGGATGTATACAAGAGAAAGGTTGAGCAGGCTGCTAAGTCAAGGGCACAACTACTTCAATCCTTGCTTGATGCTAAGCTTGAGCTTTCTGGTCTTCTATCAGCTCTTGGTGAAAACTGCTCCACAGAAATTCCTGACAAGACTTCAGGCACTATCAAGGAACAGCTTATAGCTATTGCACCAATACTGGAGCAGTTATGGCAACAAAAGGAGGAAAGAATAAAGGAGTTTTCAGATGTACAGTCACAGATTCAAAAAATATGCGGAGAGATAGCTGGGGACTTGAACCCTGATCAGACAGGATCATTTGCAGTTGATGAGTCTGACCTGTCACTGAAGAAGTTAGATGAATATCAATCCCAGCTCCAAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCAAAAGGTTCTTGAATTTGTGAGTACTGTGCATGATCTTTGTGCTGTCCTTGGTATGGACTTCTTTAGTATTGTGACTGAGGTTCATCCAAGCTTAAATGATTCTACTGGTGTTCATTCCAAAAGCATAAGCAACGGTACCCTAGCTAGGCTGGCTAATACAGTCTCGGCACTGAAAGAAGATAAAAAGCAGAGGCTGTACAAGCTCCAAGAATTAGCTTCTCAGTTGATTGATTTGTGGAATCTGATGGATACCCCTCTAGAAGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAGCTTCGGTAGATGAAGTCACTGTTCCTGGGGCCCTTGCTCTAGATCTAATTGAGCAGGCTGAAGCAGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGTAGAATGAAAGAAATTGCTTTCAAAAAGCAAACAGAACTTGAAGAGATATTTGCCTGTGCCCATATGGAAATAGACCCAGAAGCTGCTCGAGAAAAGATTTTGTCACTGATTGATTCTGGAAACATTGAACCAGCTGAGTTAATTGCTGACTTGGACAAACAGATAGCAGATGCAAAAGAAGAAGCTTTAAGCAGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAAAGTTGGCTTGAAGACTATAATCGGGATGAGAACAGGTATAATGCAAGTAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGTACTTGGGAAGAAGTACACAACATTTCATTCACATATGATGGCGTTCCTCTTCTTGCCATGTTAGATGAGTATGCCATGCTCAGGCATGAGAGGGATGAGGAAAAACGAAGGATGAGGGACCAGAAAAAGCATCATGAGCAGCCACACACTGAACAAGAATCTGTGTTTGGTTCAAGACCTAGCCCTGCTAGGCCACTTGGCAACAAGAAGGTAGTTGGCCCTCGTCCTAATGGAGGAGCAAATGGTACTCCTAACAGAAGGCTATCTCTTAATGCCCATCAAAATGGAAGGTCCACAATGAAAGATGGAAAAAGGGATAATACTAGACCAGTTGTGAATCATCTGTCCATGTCAAAAGAAGATGCTGCTTCTCATGTTTCTGGTACTGAACCAGTCCCTACATCACCCTAG 1929 0.4251 MLLKASIISDLTKCTPSHHHDLAVTRSSCYILLLCQCKLSTCCYWICIVLLNIRLGCTGTSMAVTDAQNPLLGENTCGSLLNKLQEIWDEVGESDEERDKMLLQIDQECLDVYKRKVEQAAKSRAQLLQSLLDAKLELSGLLSALGENCSTEIPDKTSGTIKEQLIAIAPILEQLWQQKEERIKEFSDVQSQIQKICGEIAGDLNPDQTGSFAVDESDLSLKKLDEYQSQLQELQKEKSERLQKVLEFVSTVHDLCAVLGMDFFSIVTEVHPSLNDSTGVHSKSISNGTLARLANTVSALKEDKKQRLYKLQELASQLIDLWNLMDTPLEERRLFDHVTCNMSASVDEVTVPGALALDLIEQAEAEVERLDQLKASRMKEIAFKKQTELEEIFACAHMEIDPEAAREKILSLIDSGNIEPAELIADLDKQIADAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRTWEEVHNISFTYDGVPLLAMLDEYAMLRHERDEEKRRMRDQKKHHEQPHTEQESVFGSRPSPARPLGNKKVVGPRPNGGANGTPNRRLSLNAHQNGRSTMKDGKRDNTRPVVNHLSMSKEDAASHVSGTEPVPTSP* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02710 642 MobiDBLite consensus disorder prediction 588 603 - -
Rops11g02710 642 MobiDBLite consensus disorder prediction 538 558 - -
Rops11g02710 642 MobiDBLite consensus disorder prediction 626 642 - -
Rops11g02710 642 Coils Coil 217 244 - -
Rops11g02710 642 Coils Coil 530 550 - -
Rops11g02710 642 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 74 625 IPR007145 GO:0000226|GO:0008017
Rops11g02710 642 Gene3D - 431 564 - -
Rops11g02710 642 Coils Coil 360 380 - -
Rops11g02710 642 MobiDBLite consensus disorder prediction 538 642 - -
Rops11g02710 642 FunFam 65-kDa microtubule-associated protein 6 431 564 - -
Rops11g02710 642 Pfam Microtubule associated protein (MAP65/ASE1 family) 79 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02710 Rops-Chr11 46661825 46671775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02710 74 602 EF-hand Containing Proteins AT5G62250 41.392 5.97e-122 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02710 K16732 - gmx:100806071 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02710 11 46661825 46671775 Rops11g02710 11 46661825 46671775 ECH
Rops11g02710 11 46661825 46671775 Rops9g00293 9 3646350 3651673 PCT