Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00291 ATGGCTCCCATAGGTGACAATGTTGTTGTGTCCTCCAATATGGAACTGGAAAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCCAACAATTCCCAAGCTCAGGCCATACATGCCAAGTCCATGCTTCATCTTCTCAAAGAATTCTTAGACAGAGTTAAGCTTGGTGCTTCTGATATCCCTTTTGTGGTTGTGGACTTGGGGTGTTCATGTGGAAGCAACACCATCAATGTTGTGGATGTGATAATCAAACACATCATCAAGCGTTATGAAGTTTTAGGGTGCAACCCACCAGAGTTTTCAGCTTTCTTCTCAGACCTTCCTAGCAATGACTTCAATACCCTCTTCCAGTTACTTTCTCCTCTTGCCAATGATGGTGTTAGCATGGAAGAATGTCTCGCCGCCAACAACCACCGCTCCTACTTTGCCGCCGGAGTTCCCGGTTCTTTCTACCGGAGGCTTTTTCCGGCTAGGTCCATTGATGTTTTCCACTCAGCCTTTTCTTTGCACTGGTTATCTCAGGTCCCAGAATCTGTGTTGGACAAGAGGTCAAGTGCATACAACAAAGGAAGGGTGTTTATCCATGGTGCTAATGAAAGCACAGCAAATGCCTACAAGAAACAATTCCAAACAGACTTGGCAAGCTTCCTTACAGCAAGGTCAGTTGAGATGAAAAGAGGGGGGTCCATGTTCTTAGTTTGCTTGGGGAGAACTTCAGTGGACCCCACAGACCAAGGTGGGGCTGGCCTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCCGTGAAAAAAGAGACAATTTTAACATTCCAGTATATGCACCAAGCTTGCAAGACTTCAAGGAGGTGGTTGAAGCTGATGGTTCATTTGCCATAAACAAGCTTGAGGTATTCAAAGGAGGGAGCCCCCTTGTGGTGAACCAACCAGATGATGCAAGTGAAGTAGGCAGGGCTCTAGCCAATAGCTGCAGGACTGTGTCTGGAGTCCTTGTTGATGCTCACATTGGTGATAAGCTCAGTGAAGAGCTGTTTCTTAGAGTGGAGCACCGAGCCACTAGTCATGCCAAGGAGCTATTGGAGCAACTACAGTTCTTTCACATTGTTGCATCGCTTTCTTTTGTTCAATGA 1164 0.4631 MAPIGDNVVVSSNMELERLLSMKGGKGEASYANNSQAQAIHAKSMLHLLKEFLDRVKLGASDIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEVLGCNPPEFSAFFSDLPSNDFNTLFQLLSPLANDGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWLSQVPESVLDKRSSAYNKGRVFIHGANESTANAYKKQFQTDLASFLTARSVEMKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISREKRDNFNIPVYAPSLQDFKEVVEADGSFAINKLEVFKGGSPLVVNQPDDASEVGRALANSCRTVSGVLVDAHIGDKLSEELFLRVEHRATSHAKELLEQLQFFHIVASLSFVQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00291 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 384 IPR029063 -
Rops9g00291 387 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 21 367 IPR005299 GO:0008168
Rops9g00291 387 Gene3D Vaccinia Virus protein VP39 34 313 IPR029063 -
Rops9g00291 387 Gene3D - 20 368 IPR042086 -
Rops9g00291 387 Pfam SAM dependent carboxyl methyltransferase 64 383 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00291 Rops-Chr9 3632140 3635500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00291 K18848 - gmx:100801476 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00291 9 3632140 3635500 Rops9g00291 9 3632140 3635500 ECH
Rops11g02707 11 46604848 46608734 Rops9g00291 9 3632140 3635500 PCT