Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02707 ATGGGAGACAATGTTGTAGTGTCCAATATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAGGCTAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCCAGGTCCATGCTTCACCTTCTCAAGGAAGCCCTAGATGGAGTTGAGCTTCATGCCCCTGACATCCCATTTGTGGTGGTTGACTTGGGGTGTTCATGTGGAATCAACACCATCAATGTGATGGATGTGATCATCAAGCACATCATCAAACGCTATGAGGCATTAGGATTGAACCCACCTGAGTTTTCTGCTTTTTTCTCAGACCTTCCTAGCAATGACTTCAACACACTCTTCCAACTCCTTCCTCCACTTGCCAACTATGGAGTTAGCATGGAAGAGTGTCTTGCTGCTAACAACCACCGTTCTTACTTCGCCGCCGGAGTCCCCGGCTCTTTCTACCGGAGGCTTTTTCCGGCCAGGTCTATTAATGTTTTCCACTCAGCCTTTTCTTTGCATTGGTTATCTCAGGTACCAGAATCTGTTGTGGACAAGAGATCAAGTGCATACAACAAAGGCAGGGTGTTTATCCATGGTGCTAGTGAGATAACAACAAATGCCTACAAGAAACAATTCCAAACAGACTTGGCAGGCTTCCTGAGTTCAAGGTCAGTGGAGATGAAAAGAGAGGGGTCCATGTTCTTGGTTTGCTTAGGCAGAACTTCAGTGGACCCTACAGACCAAGGTGGGGCTGGACTCCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCGAGAGGGATTAATTAGCAATGAAAAACGGGACAAGTTCAACATTCCAGTTTATGCACCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCTGATGGTTCATTTGCCATAAACAAGCTTGAGGTTTTCAAAGGTGGAAGCCCTCTTGTGGTGAACCAACCAGATGATCCAAGTGAAGTAGGAAGGGCTCTAGCCAATAGCTGCAGGAGTGTGTCTGGTGTCCTTGTTGATGCTCATATTGGTGACAAGCTTAGTGAGGAACTGTTTCTGAGAGTGGAGCGCAGAGCCACAAGTCATGGCAAAGAGTTATTAGAGCAACTACAATTCTTTCACATAGTTGCATCCCTTTCTTTGGCTCAATGA 1152 0.4679 MGDNVVVSNMELERLLSMKGGKGEASYANNSQAQAIHARSMLHLLKEALDGVELHAPDIPFVVVDLGCSCGINTINVMDVIIKHIIKRYEALGLNPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSINVFHSAFSLHWLSQVPESVVDKRSSAYNKGRVFIHGASEITTNAYKKQFQTDLAGFLSSRSVEMKREGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLISNEKRDKFNIPVYAPSLQDFKEVVEADGSFAINKLEVFKGGSPLVVNQPDDPSEVGRALANSCRSVSGVLVDAHIGDKLSEELFLRVERRATSHGKELLEQLQFFHIVASLSLAQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02707 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Rops11g02707 383 Gene3D - 16 362 IPR042086 -
Rops11g02707 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 17 361 IPR005299 GO:0008168
Rops11g02707 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Rops11g02707 383 Pfam SAM dependent carboxyl methyltransferase 60 380 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02707 Rops-Chr11 46604848 46608734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02707 K18848 - gmx:100801476 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02707 11 46604848 46608734 Rops11g02707 11 46604848 46608734 ECH
Rops11g02707 11 46604848 46608734 Rops9g00291 9 3632140 3635500 PCT