Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00273 ATGGAATCCCCACTATCAGTTGTGTCACCATTCAAGAGCTCTGTCTTGGGTGAAGGTGAGAAATACAAGTCTGATGTTTTTACAAGAAGCTCTGGTCCCTTGTCTAATGACAATGAAGTCAATGGAAAAGAAGCTGTTGTGTCTAATCCAGAGGAATCCATTGGAGTAGTTGATGTTTACATACATCAGGCCAGGGACATTCAAAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCTTGACTAGTGATCCTGAGAACACTCTCTCTACCAATACTATCAATGGAGGGGGAAGGAACCCTGTCTTCAATGAGAATCTTCGTCTAAGTGTTAGGACTGTTGATTCTGCTCTCAAATGTGAGATTTGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTGCCTTTATCTGAAGTGCTGTTGAAGGATGGAAAACTAGAGAAAGAGTTCTGTCTTTCTTCAACTGATCTATTCCATTCCCCAGCTGGTTTTGTTCAATTGTCTGTTACTTACACTGGTACTTCACCTGATGTTATGGCAATTTCTGCAATGCCTAATGAATTGGACAAAAGTGGCACTGAGAAGGACTCTGAAACATGTGAGTCACTGGTCAGAGATTTAGATAAAATTGAGTTCCCGGATCCAAAGATTGTGAATGAAGACCACTTGATGGTTTCAGAATATTATGGCATTCCATGTGAGGAGAGTCAGTGTTCTGATAGCTTGGCCACTACTGACACTGAAAATCTAAGTTCAGAAGCAGGAGTTCAGCTCGTTGAAAGTTTCTCAGCATGCAGCGTTGAATCTGTCCAACCACCTCCTAAGGTTGATTCTCCACCCAGCATTGTGTCAACAAATGGGGTTTCTTCTCCTTCAGTGGCTGCAAGCTCAGACTCATCTGATGCTGCTGCTTCTAAGTCTCCCAATCAGGAACAAGTTTCAAACACCAAAGAGAAAAATGTGGATATCAAAGATGGTGAGAGTGATGATTCCTCAAATGGGGTGGTGAATGAGTCATTCCCTAAGCCTGTTGTGACTGTGAACATTGAGCCAGAACCAAAGGTGGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACTGAGTCATTAGCCAAAATGAAGCTACCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCAAGCTCTGAACAGAAACTACAGACATCAAAGAGTGGTAACTCCCGTGTGTTTTATGGAAGCCGTGCATTCTTCTGA 1290 0.4233 MESPLSVVSPFKSSVLGEGEKYKSDVFTRSSGPLSNDNEVNGKEAVVSNPEESIGVVDVYIHQARDIQNICIYHKQDVYAKICLTSDPENTLSTNTINGGGRNPVFNENLRLSVRTVDSALKCEIWMLSRVKNYLEDQLLGFALVPLSEVLLKDGKLEKEFCLSSTDLFHSPAGFVQLSVTYTGTSPDVMAISAMPNELDKSGTEKDSETCESLVRDLDKIEFPDPKIVNEDHLMVSEYYGIPCEESQCSDSLATTDTENLSSEAGVQLVESFSACSVESVQPPPKVDSPPSIVSTNGVSSPSVAASSDSSDAAASKSPNQEQVSNTKEKNVDIKDGESDDSSNGVVNESFPKPVVTVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQKLQTSKSGNSRVFYGSRAFF* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00273 429 PANTHER EXPRESSED PROTEIN 2 429 - -
Rops9g00273 429 MobiDBLite consensus disorder prediction 397 418 - -
Rops9g00273 429 MobiDBLite consensus disorder prediction 279 350 - -
Rops9g00273 429 MobiDBLite consensus disorder prediction 393 418 - -
Rops9g00273 429 MobiDBLite consensus disorder prediction 328 342 - -
Rops9g00273 429 Gene3D C2 domain 50 211 IPR035892 -
Rops9g00273 429 ProSiteProfiles C2 domain profile. 40 161 IPR000008 -
Rops9g00273 429 SMART C2_3c 56 159 IPR000008 -
Rops9g00273 429 Pfam C2 domain 56 161 IPR000008 -
Rops9g00273 429 MobiDBLite consensus disorder prediction 291 327 - -
Rops9g00273 429 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 185 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00273 Rops-Chr9 3401209 3404122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00273 - - gmx:100781587 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00273 9 3401209 3404122 Rops9g00273 9 3401209 3404122 ECH
Rops11g02666 11 45532701 45535141 Rops9g00273 9 3401209 3404122 PCT