Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02666 ATGGATTCCCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAGTCTTGGGTGGGGGTGAAAAGCACAAGTCTGATGTTTTCACCCCAAGCTCTGGTCCCTCATCTAAGGACATTGAAGTCAATGGGAAGGAAGTTGTCATGTCAAATGTGGAGGAGTTCCTTGGAGTTCTTGATGTTTACATACATCAGGCAAGGGACATTCATAACGTCTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCTTGACTTGTAATCCTGAGATCACTGTGTCTACCAAGACCATCAATGGAGGAGGAAGGAACCCTGTCTTTAATGATAATTTGCGTCTGAATGTTGGAACTGTTGATACTTCTCTCAAATGTGAGATATGGATGCTGAGTAGAGTGAAGAATTATCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTACCTTTGTCTGAAGTATTAGTCCAGGATGGGAAACTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCTCCTGCAGGTTTTGTTCAGTTATCCCTTTCTTACACTGGTGCTTCACCTGATGTTATGGCAATTTCTTCAATGCCTACTAAGGTGGCCTCACAAGCCACTGTGCAGGACTCAGAAACATCTGAGTCACTGACCAGGGATTTGGATAAAATTGAGTTCCCAGATCCCAAGATTGTAAATGAAGACCACTTGATGGTTTCAGAATATTTTGGTATTCCATGTGAGGAAACTCAATGCTCTGATAGCTTGGCAACTTCTGATGCTGAAAATCAAAGTTCTGAAGCTGGTGTTCGTCTTGTTGAAAGCTTCTCAGCATGCAGTGTTGAGTCTGTTCAACCTCCTAAGGTTGATTCTCCACCTAGCAGTGTGTCAACAAATGGGGTTTCTTCTCCTTCTGCACCTGCAAGCTCAGAATCATCCGATGCTGCCGTTTCTAAGCCTCCCGTTCAGGAACAAGTTTCAGGCACCAAAGAGGTTAAAAATGTGTATGTTAAAGATGGTGAGAGTGATTCCTCAAGTGGGGTTCCAAGTGACTCATTTCCTAAGCCTGTTGTGACTGTGAACATTGAGCCAGAACCAAAGATGGTGCAACAGGATATAGTAGACATGTACATGAAAAGTATGCAGCAATTTACTGAGTCATTAGCAAAAATGAAGCTTCCTATGGACATTGAAAGTGAACCAACTAGTTCAGGAAATTCAAGCACTGAGCAGAAACTGCAGCCATCTAAGAACAGTAACTCCCGTGTCTTTTATGGGAGTAGAGCTTTCTTCTGA 1287 0.4266 MDSPQSVVSPFRSSVLGGGEKHKSDVFTPSSGPSSKDIEVNGKEVVMSNVEEFLGVLDVYIHQARDIHNVCIYHKQDVYAKICLTCNPEITVSTKTINGGGRNPVFNDNLRLNVGTVDTSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQDGKLEKEFSLSSTDLFHSPAGFVQLSLSYTGASPDVMAISSMPTKVASQATVQDSETSESLTRDLDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDSLATSDAENQSSEAGVRLVESFSACSVESVQPPKVDSPPSSVSTNGVSSPSAPASSESSDAAVSKPPVQEQVSGTKEVKNVYVKDGESDSSSGVPSDSFPKPVVTVNIEPEPKMVQQDIVDMYMKSMQQFTESLAKMKLPMDIESEPTSSGNSSTEQKLQPSKNSNSRVFYGSRAFF* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02666 428 Gene3D C2 domain 51 215 IPR035892 -
Rops11g02666 428 MobiDBLite consensus disorder prediction 391 428 - -
Rops11g02666 428 MobiDBLite consensus disorder prediction 280 327 - -
Rops11g02666 428 SMART C2_3c 56 159 IPR000008 -
Rops11g02666 428 MobiDBLite consensus disorder prediction 280 331 - -
Rops11g02666 428 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 55 185 IPR035892 -
Rops11g02666 428 PANTHER EXPRESSED PROTEIN 1 428 - -
Rops11g02666 428 CDD C2 57 163 - -
Rops11g02666 428 MobiDBLite consensus disorder prediction 396 422 - -
Rops11g02666 428 Pfam C2 domain 55 162 IPR000008 -
Rops11g02666 428 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Rops11g02666 428 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02666 Rops-Chr11 45532701 45535141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02666 - - gmx:100796499 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02666 11 45532701 45535141 Rops11g02666 11 45532701 45535141 ECH
Rops11g02666 11 45532701 45535141 Rops9g00273 9 3401209 3404122 PCT