Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00198 ATGGAAGAAAAGGAATGCGTGAGAGGAGAGGAGGAGAGGGTTCCTTTGTTCGAGACAAAAGAAGAAGCAAGATTTGGAGGAGTTTACAAGTTGTTAGCATGTTCAATATTTGGATGTGTGAGTTTGATTTGGGTGTACAGAATAATGAACATCCAAAGGGGTGGAGGGAGGTGGGCTTGGATGAGTGTTTTTGTGTCGGAGCTGGCTTTTGGATTGTATTGGATTATCACTCAGTCTGTTCGTTGGAGAGTGGTCCATCAAACAACTTTCAAAGAGAGGCTCTTGCACAGATATGAGGAAGAGAATTTGGCAATGGTGGACATTTTTGTGTGCACAGCAGACCCAATGCTGGAGCCTCCTTGCATGGTGATTAACACCATATTATCAGCTATGGCATTCAATTATCCTTCAAACAAATTGAGTGTGTATCTCTCTGACGATGGAGGCTCGGAGCTCACTTTCTATGCTCTCTTTAAGGCATCCATTTTCTCCAAACATTGGTTGCCATTCTGCAGAAGATTCAATGTTGAACCCAGGTCACCCGAGGCTTACTTTTCCACTGGACAAAATTTTAGCAGTAATACCACTGAGTTTGGCCAAGCATGGCTATTTATCAAGAAATTATACGAAGACATGAAAAGTGATATCGAATCAGCTGTAGCAAGGGGCAAGCTTCCAGAAAATGTAAGGAATCAACATACAGGATTCTCAGAATGGAATCCCAAAACCACAAAGCAGGATCACCAATCTATTGTGCAGATCATAATCGATGGGAGGGACACAAATGCTGTAGATGAAGAGGGATTTCAATTGCCAACAGTGGTTTACATGGCACGCGAGAAACGACCCAACCACCCTCATCACTTCAAAGGAGGAGCTTTGAATGCATTGATAAGAGTGTCATCAGAGATAAGCAATGCACCTTTCATCCTCAACTTGGATTGTGATATGTACTCCAATAATGCAGATATAATTCAAGAAATACTATGTTTCTTCTTGGATGAAACGAAAGGTCATGAGATAGCTTATGTGCAATTTCCACAAAGCTATAATAATATCACCAAGAATGACCATTATGCAAATTCTTCTCTTGTGGCCAATGAGATTGAACTAGCTGGCATTAGTGGATATGGAGCAGCCTTGTTCTGTGGAACTGGGTGTTTCCATCGAAGAGAAAGTCTATCAGGAACTCATTTAAAAGATTACGATTACATAGCAAAATGGGACACCGAGCCTAAAAGAGAAGGCCACAGAACAATCAATGAATTGAATGATGCATCGAAGGCTCTGGCCACTTGCACCTATGAGCAGGGCACTCAATGGGGGAAGGAGATGGGGTTAGTATATGGCATTCCTGTGGAAGACATTGCTACTGGCCTTGTAATCTCATGCAGGGGTTGGAAATCCATTTATTACAATCCGAAAAGGAATGCTTTTGTGGGTGTAGCTCCAACAACCTTAGACGTAGGTCTTGTTCAACATAAGAGGTGGTCGGAAGGCATGTTCCAAGTTTTCTTCTCCAAGTATTGCCCTTTCATTTATGGGCATGGGAAGATACACTTGGGTGTTCAAATGGGATATTGTAATTACCTCTTATGGGCTCCCTTGTCTTTGCCTACTCTTTGTTATGTCATTGTTCCTTCTATTTGCTTACTTCGTGGCATTCCATTGTTCCCACAGCTTTCAAGCCTATGGCTCCTTCCCTTTGCATATGCATTTCTTGCCACGAATGGCTATAGTTTATTTGAGTATTTGAATTGTGGGTCCACAACAAAGAGTTGGTGGAATATGCAGAGAATGAAGCTCATCCGAAGGACCACAGCGTATCTCTTTGGTTTCATTGACACCATGACCAAGCAATTAGGACTCTCACAAACAAACTTTGCCATCACAGATAAGGTGGTTACAGAGGAGGTTCAAAAGCGATACGAGCAAGAGATCATTGATTTTGGAGGCTCTTCAATAATGTTAACCTTATTAGCAACAGTGGCATTGCTAAACATTTTTGGTCTCTTTGGGGGAATTATAAAGATTCTGATGGATTTGGAATTCAACAGCTCAAGCCAATTGATGATGCAGATTATGCTGAGTTCATTGATAGTAATGGTCAATCTACCAGTGTATGAGGCACTTTTCATCCGCAGTGATAAAGGTTGCATATCATTCTCAGCCATGTTCAAGTCCATTGTTTTGGCTTCATTGGTTTGTTGCCTATCACCTCTCATCTGCTAG 2232 0.418 MEEKECVRGEEERVPLFETKEEARFGGVYKLLACSIFGCVSLIWVYRIMNIQRGGGRWAWMSVFVSELAFGLYWIITQSVRWRVVHQTTFKERLLHRYEEENLAMVDIFVCTADPMLEPPCMVINTILSAMAFNYPSNKLSVYLSDDGGSELTFYALFKASIFSKHWLPFCRRFNVEPRSPEAYFSTGQNFSSNTTEFGQAWLFIKKLYEDMKSDIESAVARGKLPENVRNQHTGFSEWNPKTTKQDHQSIVQIIIDGRDTNAVDEEGFQLPTVVYMAREKRPNHPHHFKGGALNALIRVSSEISNAPFILNLDCDMYSNNADIIQEILCFFLDETKGHEIAYVQFPQSYNNITKNDHYANSSLVANEIELAGISGYGAALFCGTGCFHRRESLSGTHLKDYDYIAKWDTEPKREGHRTINELNDASKALATCTYEQGTQWGKEMGLVYGIPVEDIATGLVISCRGWKSIYYNPKRNAFVGVAPTTLDVGLVQHKRWSEGMFQVFFSKYCPFIYGHGKIHLGVQMGYCNYLLWAPLSLPTLCYVIVPSICLLRGIPLFPQLSSLWLLPFAYAFLATNGYSLFEYLNCGSTTKSWWNMQRMKLIRRTTAYLFGFIDTMTKQLGLSQTNFAITDKVVTEEVQKRYEQEIIDFGGSSIMLTLLATVALLNIFGLFGGIIKILMDLEFNSSSQLMMQIMLSSLIVMVNLPVYEALFIRSDKGCISFSAMFKSIVLASLVCCLSPLIC* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00198 743 Pfam Cellulose synthase 106 398 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops9g00198 743 Pfam Cellulose synthase 429 736 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops9g00198 743 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 242 411 IPR029044 -
Rops9g00198 743 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 96 188 IPR029044 -
Rops9g00198 743 SUPERFAMILY Nucleotide-diphospho-sugar transferases 254 509 IPR029044 -
Rops9g00198 743 FunFam Cellulose synthase isolog 95 193 - -
Rops9g00198 743 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 20 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00198 Rops-Chr9 2496065 2503287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00198 10 739 Glycosyltransferase AT1G55850 47.483 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00198 - - gmx:100816849 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00198 9 2496065 2503287 Rops9g00198 9 2496065 2503287 ECH
Rops11g02561 11 43665780 43681612 Rops9g00198 9 2496065 2503287 PCT