Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04246 ATGCCAAAGCTAAGATCTTGGACTAAGATGTGGCCATCTATTGTCTGGGTGTGTATTCTGAATCTTGTCCTGAACTTCAAGATCATAGCATCAGCAGATGACAATGGAAGTAGTAGTGGTTATGCATCAGAAAGTACGTGCCAGAACACAAATTATCAAATTTTCCTCCCTCCACCATATCAGAATATATCCTCTCCGATATGCAAACCTGTTTGGCATACATATGAATTAAGGTACACCAAGAATGGTGATATTACAACAATCATATTATCTGCTCCATACACTGTTGGATGGGTGGGAATTGGATTTTCTAGAGATGGTAAGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTAATAAACATGGTCATGCAAAAATCAAGCAGTTTTATCTAAAGGGTAGGAAGCCATCAGAAGTCATTGCAGGCAAAGGTGAACTGCCTCTAAATACTGTGCCTCCAGCTGTGGCAACAAATGGAGCTGAAATTTATTTGGCATTTCAGCTGCAAACGACAGCTCCATATGGGAAGCAACCAATTTTATTGGCTTTTGGTACTAAACATCCACACGAACACCATCTGTCAAAGCATGATGACAAAACAACAATTGTATTTGATTTTTCTTCAGGTTCTGCGGGTCCATCATCCAATGGGTTGATTAAGATGAGGAAGAGCCATGGAATAATGGGTATAATAGGGTGGGGCCTAATCCTGCCTGCAGGGGCAATTGTTGCTAGGTACTTCAAACATAAGGATCCCCTATGGTTCTATCTTCATTCAATCTTTCAGTTTGTGGGATTTGTATTTGGGCTTGTCACGGTCCTTCTTGGATTACAACTCTACAACAAAATGCACGTCCACATACCAGCTCACAGAGGCATAGGCATCTTTGTCCTTGTGCTAAGTATTCTTCAGATACTGGCATTCTTCTTGAGGCCAAACAAGGATTCCAAGATTCGCAAAATTTGGAATTTGTACCACAGTTGGTTTGGAAGAATGGCACTTTTCTTTGCAGCCTTGAACATAGTGTTGGGGATGCAAGCTGCGGGAGCAGGGAATGATTGGAAGGCAGGCTATGGATTCCTTGTTAGTATTATAATCGTTACAGTTATCGTTCTAGAAGTATTGGCATATTTGAAAAGGTCAGAGGAGCGTTCTCTTCCACCGAATTTCCAAATGGACTCAGTTGGAGAAGTTCCCTTTCCAAGTCATATGGCTAAAGGGTGA 1227 0.4165 MPKLRSWTKMWPSIVWVCILNLVLNFKIIASADDNGSSSGYASESTCQNTNYQIFLPPPYQNISSPICKPVWHTYELRYTKNGDITTIILSAPYTVGWVGIGFSRDGKMVGSSAMVGWINKHGHAKIKQFYLKGRKPSEVIAGKGELPLNTVPPAVATNGAEIYLAFQLQTTAPYGKQPILLAFGTKHPHEHHLSKHDDKTTIVFDFSSGSAGPSSNGLIKMRKSHGIMGIIGWGLILPAGAIVARYFKHKDPLWFYLHSIFQFVGFVFGLVTVLLGLQLYNKMHVHIPAHRGIGIFVLVLSILQILAFFLRPNKDSKIRKIWNLYHSWFGRMALFFAALNIVLGMQAAGAGNDWKAGYGFLVSIIIVTVIVLEVLAYLKRSEERSLPPNFQMDSVGEVPFPSHMAKG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04246 408 Gene3D - 201 386 - -
Rops8g04246 408 SMART 561_7 225 346 IPR006593 -
Rops8g04246 408 CDD DOMON_DOH 74 135 IPR045266 -
Rops8g04246 408 SMART DOMON_3 98 185 IPR005018 -
Rops8g04246 408 Pfam Eukaryotic cytochrome b561 226 347 IPR006593 -
Rops8g04246 408 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 30 379 - -
Rops8g04246 408 ProSiteProfiles Cytochrome b561 domain profile. 188 382 IPR006593 -
Rops8g04246 408 ProSiteProfiles DOMON domain profile. 73 185 IPR005018 -
Rops8g04246 408 SUPERFAMILY CBD9-like 79 216 - -
Rops8g04246 408 CDD Cyt_b561_FRRS1_like 199 361 - -
Rops8g04246 408 Pfam DOMON domain 75 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04246 Rops-Chr8 85104844 85107502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04246 - - gmx:100782231 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04246 8 85104844 85107502 Rops4g01632 4 39728073 39730993 PCT