Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01632 ATGTGGCCATCTTTTGTTAGGCTGTGTATTCTGAATCTTGTCTTGGATTTCAAAATCATAGCACTGGCGGATGACAGTGGTGGAAATGGTGGTTTTGCAGCAGAAAATGCTTGCAAGAACACAAATTATCAAAGTTTCCTGCCTCCACCATACCAGAATATATCCCATATGATATGCACATCTGTATGGCATACCTATGAATTGAGGTACATCCAGGAAGATCATACCACAACTATCATATTATCTGCTCCCTACACTATAGGGTGGGTAGGAATTGGATTTTCTAAAGATGGTATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTAATAAACATGGTCATGCAAAAATCAAGGAATTTTACCTACGGGGTAAGAAGCCATCAGAAGTCATAGTAGACAAAGGTGAACTACCACTCAATAATGTGCCTGCTGCTGTGGCAACTAATGGAGCTGAAATTCATTTGGCATTTCAGTTGCAGATGACAACCCCATTAGAGAGACAATCGATTTTATTGGCTTTTGGTAGTAAATATCCACAGAATAACCACCTCTCCAAGCATGAAGACGAAACAGCTATTGTATTTGATTTTGCAGCAGGTACCAAGGGTCCTACATCCCATGAGTTGATTCAGATGAGGAAGAATCATGGAATAGTGGGTATAATAGGGTGGGGTCTGATCCTTCCTGTGGGGGCCATTGTTGCTAGATACTTCAGGCACAAAGATCCCCTGTGGTTCTATCTCCATGCAGTCATTCAATTTGTGGGATTCACATTTGGGCTTGTTACAGTCCTACTTGGATTACAACTCTATTCCAAAATGCATGCCCATATACCAGCTCACAGAGGCATAGGCATCTTTGCCCTTGTAATGTGTATTCTTCAGATATTGGCTTTATTCTTGAGACCAAACAAGGATTCCAAGATTCGAAAATATTGGAATTGGTATCACAGCTGGTTTGGAAGGTTGGCACTTTTCTTTGCAGCCATTAACTTAGTGTTGGGGATGCAAGCTGCAGGAGCAGGAAGTGATTGGAAGATAGGCTACGGATTTCTTGTTAGTATAACAGTTGTTGCAGCTATCGTTCTGGAAGTATCGGCTTATTTGAAAAGATCAGAGATGCGTTCTCTGCCTCCTAACTTCCATATAGACCCTGTTGTAGAAGCTACATTTCCAAGTAATCAAGTTAAAAGGTGA 1200 0.4142 MWPSFVRLCILNLVLDFKIIALADDSGGNGGFAAENACKNTNYQSFLPPPYQNISHMICTSVWHTYELRYIQEDHTTTIILSAPYTIGWVGIGFSKDGMMVGSSAMVGWINKHGHAKIKEFYLRGKKPSEVIVDKGELPLNNVPAAVATNGAEIHLAFQLQMTTPLERQSILLAFGSKYPQNNHLSKHEDETAIVFDFAAGTKGPTSHELIQMRKNHGIVGIIGWGLILPVGAIVARYFRHKDPLWFYLHAVIQFVGFTFGLVTVLLGLQLYSKMHAHIPAHRGIGIFALVMCILQILALFLRPNKDSKIRKYWNWYHSWFGRLALFFAAINLVLGMQAAGAGSDWKIGYGFLVSITVVAAIVLEVSAYLKRSEMRSLPPNFHIDPVVEATFPSNQVKR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01632 399 ProSiteProfiles DOMON domain profile. 64 176 IPR005018 -
Rops4g01632 399 CDD DOMON_DOH 61 193 IPR045266 -
Rops4g01632 399 CDD Cyt_b561_FRRS1_like 204 366 - -
Rops4g01632 399 ProSiteProfiles Cytochrome b561 domain profile. 179 373 IPR006593 -
Rops4g01632 399 SMART DOMON_3 89 176 IPR005018 -
Rops4g01632 399 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 35 369 - -
Rops4g01632 399 Pfam DOMON domain 70 135 - -
Rops4g01632 399 SMART 561_7 216 337 IPR006593 -
Rops4g01632 399 Pfam Eukaryotic cytochrome b561 228 338 IPR006593 -
Rops4g01632 399 Gene3D - 192 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01632 Rops-Chr4 39728073 39730993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01632 - - gmx:100807608 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01632 4 39728073 39730993 Rops4g01632 4 39728073 39730993 ECH
Rops8g04246 8 85104844 85107502 Rops4g01632 4 39728073 39730993 PCT