Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04222 ATGGCTCGTGGATGCAAGGAGAAAAATGGGTGCAGTAGCACCCATCTTGTTACAGCCATAAGTTACCGGCCCTACACCCAGAATGAGTGCATGAAGAGCATGCTCACACTTGGAAATGCCAGCTACAAGACCACCGATGTTCAAAGGGTCACCTTGCTTGGGGGTGTTGTCAACTTGGCACTTGAGTCCCTGTCTCGTGAACAAGGAAAGCCACCACCACACTGCAAGTCAGTGCTAAGTCAAAGAAGCCTTTTTTTTTGTTTAAAACAAAAAAGGAAGTATCTCTCTCTCTCTCCCCACTGCTTGAATTGCATTGAAGTGAGCAAACACAACCGAACCTTCTTCCTTCTTTCTGCTCCAACCTTCTCTTCTTCATTTCTTTCATCCCACTTTCTTTACTCTCTGTTAGACTCCCCAAACAACAAACAAGGAAGATTCTCACTGAGTTGCAGTTTAAGGATGTTGGAGAAAGTGGAAGAGTTTAACATGGACAAAGTTATAGAAGAATTTGAGTCACTGACAATGGATGCAGAAAGGGTTCAGAGGGAAACGCTCAAAAGAATTTTGGAGGATAACGCATCAGCTGAGTATTTGCAGAATTTGGGTCTTAATGGAAGGACTGAACCCGAGAGTTTCAAGGCCTGTGTTCCACTGGTTACTCACAAAGAATTGGAACCTTATATCTACCGAATAATTGATGGTGATACTTCTTCTATTCTCACTGGAAAATCCATCACAACTATGTCTTTAAGTTCTGGCACTACCCAGGGGAAGCCAAAATATGTACCATGGAATGATGATTTGTTTGAGACCACGATGCAGATATATCAGACCTCTTTTGCCTTTAGGAACAGAGAGTTTCCTATAAAAAATGGGAAGGCTTTGAGCTTTATATACGGCAGCAAACAGAGCAAAACAAAAGGGGGTCTCGCAGCTAGAACTGCAACAAGCAATTTGTTCTGTAATCCAGATTACAAACGTGCAATGAAGGCACTGCAATCCCAATGCTGCAGCCCAGATGAAGTGATATTTGGTCCTGATTTCTTCCAATCACTATACTGCCATCTATTATGTGGGCTGATTTTCAGGGAGGAAGTTCAGTTGGTGTGTTCTACATTTGCACATAGCATCATCCATGCTTTTAGAACCTTTGAACAAGTGTGGGAAGAGCTCATTACTGATATCAGAGAAGGGGTTCTTACAAGCAGAGTCACCGTTCCATCCATTCGAATGGCCATGTCTAAACTGCTCAAACCAAACCCAGAATTAGCCAACCTAATCCACAAAAAATGCATGGGGTTGAGCAACTGGTATGGTTTGATACCAGAACTTTTTCCCAATGCTAAATACATTTATGGCATCATGACTGGGTCAATGGAGCCTTATTTGAAAAAACTGAGGCACTATGCTGGGGATCTGCCTCTGTTGACTGCTGACTATGGATCTTCTGAAGGATGGATAGCAGCAAATGTGAACCCAAAACTTCCCCCTGAATTGGCCACTTATGCTGTGCTTCCTAACATTGGTTACTTTGAATTCATTCCTCTGACTCAGCTTGAGAATGCTAAGGGAGACCATACTTTCCTTTGTATTGATCCTCAGCCAGTGGGCCTCACTGAAGTGAAGATTGGTGAAGAATATGAAATTGTTATGACCAATCCAGCAGGTTTATACCGGTATAGGCTAGGGGATGTGGTTAAGGTTATGGGATTCCATAACTCAACTCCAGAACTCCAATTTGTTCGGCGGAGCAGTCTTTTGCTGAACATCAACATTGACAAGAACACAGAGAAGGATTTACAGTTAGCTGTGGAAGCAGCAGGCAAATTGTTAGCAGAGGAGAAGTTGGAAGTTGTTGACTTCACTAGCCATGTTGATTTATCTAAAGAACCAGGGCACTATGTCATCTTCTGGGAAATAAGTGGGGAAGGAAATGAAGAACTACTCGGTGAATGCTGCAACTGTTTGGACAAGTCTTTTGTTGATGCAGGCTACACCAGTTCTCGTAAAGTCAACTGCATTGGTCCCCTTGAACTCCGAGTTGTTAGGAGGGGAACGTTCCAGAAAATTCTTGATCATTACCTGGGATTAGGAACCGCTGTTAGTCAGTATAAGACACCAAGATGTATAGGTCCTATAAATAGCAGTGTGTTGCAAATCTTGAGTGAAAATGTAGTGAACAACTATCTCAGTACTGCTTTCAATTGA 2208 0.4271 MARGCKEKNGCSSTHLVTAISYRPYTQNECMKSMLTLGNASYKTTDVQRVTLLGGVVNLALESLSREQGKPPPHCKSVLSQRSLFFCLKQKRKYLSLSPHCLNCIEVSKHNRTFFLLSAPTFSSSFLSSHFLYSLLDSPNNKQGRFSLSCSLRMLEKVEEFNMDKVIEEFESLTMDAERVQRETLKRILEDNASAEYLQNLGLNGRTEPESFKACVPLVTHKELEPYIYRIIDGDTSSILTGKSITTMSLSSGTTQGKPKYVPWNDDLFETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQSKTKGGLAARTATSNLFCNPDYKRAMKALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQLVCSTFAHSIIHAFRTFEQVWEELITDIREGVLTSRVTVPSIRMAMSKLLKPNPELANLIHKKCMGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGDLPLLTADYGSSEGWIAANVNPKLPPELATYAVLPNIGYFEFIPLTQLENAKGDHTFLCIDPQPVGLTEVKIGEEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELQFVRRSSLLLNINIDKNTEKDLQLAVEAAGKLLAEEKLEVVDFTSHVDLSKEPGHYVIFWEISGEGNEELLGECCNCLDKSFVDAGYTSSRKVNCIGPLELRVVRRGTFQKILDHYLGLGTAVSQYKTPRCIGPINSSVLQILSENVVNNYLSTAFN* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04222 735 Coils Coil 163 183 - -
Rops8g04222 735 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 160 734 IPR004993 -
Rops8g04222 735 Pfam GH3 auxin-responsive promoter 169 710 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04222 Rops-Chr8 84748323 84756120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04222 170 732 EF-hand Containing Proteins AT1G23160 39.273 8.35e-134 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04222 K14506 - gmx:100794598 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04222 8 84748323 84756120 Rops4g01608 4 39360675 39364853 PCT