Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03898 ATGTCGCTTGTGACAGAGGAAATCAAGGCAAGATCAGAGGTGTACCATGGAGATGAACTCTGCCAAGTGAAATCCAAGGAACTGCTGAAGGAAATAGCCCTACCCAATGGCCTTTTACCTTTGAAGGACATGGAAGAGTGTGGTTATGACAGAGAAAGAGGGTTTGTGTGGCTTAAGCAGAAGAAGAGCACAACCCACAAGTTTGAAAAGATTGGGAAGCTGGTTTCTTATGGCCCTGAAGTCACTGCACAAGTTGAGCATGGTAAGATCAAGAAACTCACTGGTGTGAAGACTAAAGAGCTCTTGCTTTGGATCTCTCTGAGTGATATCTATATTGATGATCCACCAACTGGCAAGATCACTTTCCAAACCCCTGCTGGGCTTTTCAGATCATTCCCTGCCTCTGCTTTTGAAATTGAAGAGAAACCCACCAAGGAAAATAATAAGAACCAAGTCAAAGAGATCTGA 468 0.438 MSLVTEEIKARSEVYHGDELCQVKSKELLKEIALPNGLLPLKDMEECGYDRERGFVWLKQKKSTTHKFEKIGKLVSYGPEVTAQVEHGKIKKLTGVKTKELLLWISLSDIYIDDPPTGKITFQTPAGLFRSFPASAFEIEEKPTKENNKNQVKEI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03898 155 PANTHER T31J12.3 PROTEIN-RELATED 21 140 IPR007493 -
Rops8g03898 155 SUPERFAMILY At5g01610-like 3 144 IPR036758 -
Rops8g03898 155 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Rops8g03898 155 Gene3D - 5 148 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03898 Rops-Chr8 79903897 79904527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03898 - - gmx:100306660 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03898 8 79903897 79904527 Rops8g03898 8 79903897 79904527 ECH
Rops8g03898 8 79903897 79904527 Rops6g01954 6 37352401 37353204 PCT