Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01954 ATGTCTCTTGTCACTGAAGAGATCAAAGGCAGGTCAGAGGTGTACCATGGAGATGAGATGTGCCAAGAAAAGTCCAAGGTACTGCTGAAGGAGGTAGGGCTACCCAATGGCCTTTTGCCCTTGAAAGACATGGAAGAATGTGGGTATGACAGGGAGACTGGGTTTGTGTGGCTTAAGCAGAAGAAGAGCTCAAACCACAAGTTTGAGAAGATAGGGAAGCTGGTGTCTTATGCTCCTGAAGTCACTGCCTATGTGGAGGTTGGTAAGATCAAGAAGCTGACTGGTGTGAAGACCAAGGAGCTGTTGCTTTGGGTCACACTGAGTGATATCTATGTGGATGATCCACCCACTGGCAAGATCACTTTCAAGACCCCTTCAGGGCTTTTCAGGTCATTCCCAGTGTCAGCTTTTGAAATAGAAGAAGAGCAAGTTAAGGAGGAGGTCAAGGAAGATAACAAACAAGTCAAAGAAGCAGCTGCTACTGCTGCTGTTGAAGTCAAAGAGGTCGAGAGCCTTGGAGTGCAGCTATAG 531 0.4727 MSLVTEEIKGRSEVYHGDEMCQEKSKVLLKEVGLPNGLLPLKDMEECGYDRETGFVWLKQKKSSNHKFEKIGKLVSYAPEVTAYVEVGKIKKLTGVKTKELLLWVTLSDIYVDDPPTGKITFKTPSGLFRSFPVSAFEIEEEQVKEEVKEDNKQVKEAAATAAVEVKEVESLGVQL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01954 176 PANTHER T31J12.3 PROTEIN-RELATED 22 140 IPR007493 -
Rops6g01954 176 SUPERFAMILY At5g01610-like 5 143 IPR036758 -
Rops6g01954 176 Coils Coil 134 165 - -
Rops6g01954 176 Gene3D - 6 149 IPR036758 -
Rops6g01954 176 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01954 Rops-Chr6 37352401 37353204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01954 - - gmx:100500427 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01954 6 37352401 37353204 Rops6g01954 6 37352401 37353204 ECH
Rops8g03898 8 79903897 79904527 Rops6g01954 6 37352401 37353204 PCT