Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03895 ATGAAACCATCATCTAGGATTTTCATTGGTCTTAAGAATTCATCGTTTCTTGCAAGGTGTCACCATAATCTTACTATGTCTATGTCTAACTCTAATCCTTTTGGTCTCAATCTTAATCACAACAACATGCACTGCCCTTTTCGCATGTTGGAGTTTGGACGCATAATGAATAGTACCCAGAAGAAAGCTCTTGGGTTACCCTCTTCAAGTTTTGGCCAGTCAAGTTCCCTTAGTTTAAGTGCAACAAGAACAAAGGAACGTGTCTCTTCCATTGCTGGAGTTGCCTTCAAGGCTCGTGACTTTTCAGGCTCAGTTGAGACGCTTGTCAATGACAACAATGATGAGAGGGTTTACGCAAAGGGTGGCATGAAAATGAAGCCATTGGTGGTGGAAAGAATTGATAAAGATGATAATAAGAATGGTGGAGGAGAGGAGGAAGAGTCTCGGTTAGAAGATGGTAAGGAAGATGTGAACATGGAGAATTCACGTGTTTTGAAGAATGTATCTGAGTCCAAGAACAATGATGATGAGACAGAGGTGGAAAAAGAGGCATGGAAGTTATTGCATGATGCGCTTGTGACATATTGTGACACCCCTGTAGGAACAGTGGCAGCAAATGATCCAGGTAACCAGCAACCCTTGAATTATGATCAAGTCTTTATTCGAGATTTTATCCCTTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAAAAGATATTGTCAAGAACTTTCTCCTTCACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGACTGTTATAGCCCAGGGCAGGGTTTGATGCCTGCTAGTTTCAAAGTTAAAACTGTAAAACTTGATGAAGAAAAGACTGAAGAAGTTTTAGATCCTGATTTTGGGGAATCCGCTATTGGTCGTGTTGCTCCTGTAGATTCAGGGTTGTGGTGGATCATACTGCTACGGGCTTATGGGAAGATCACTGGTGACTACAGCTTGCAAGAAAGAGTGGACGTTCAAACAGGCTTACATATGATCCTTCACTTGTGTTTAACGGATGGCTTCGATATGTTTCCTTCTCTGTTAGTAACTGATGGCTCTTGCATGATAGACAGGAGGATGGGTATTCATGGTCACCCTCTTGAGATTCAAGCATTATTTTACTCGGCTCTTCGCTCAGCCCGTGAGATGGTTGCTGTAGATGATGGATCCAAGAAACTGGTTGGAGAAATTAACAACAGACTCAGTGCACTATCATTCCACATTAGAGAATATTATTGGTTGGATATGAAAAAGATGAATGAGATATACAGGTATAAAACAGAAGAGTACTCCATGGATGCAACTAACAAGTTCAACATCTTTCCAGAACAAATTCCAATGTGGCTAATGGATTGGATTCCAGAGGAAGGTGGATATCTGATAGGGAATCTCCAGCCAGCTCAAATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCTGTTGTTTCATCTCTTGGTACCCCAAGACAGAATAAGGCTATTTTGAATCTGATAGAAGCAAAATGGGATGATCTAGTGGGTAAAATGCCCCTTAAGATATGTTATCCTGCCTTGGAGCAAGAAGAATGGCGCATAATTACCGGCAGCGACCCAAAAAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTCTGTGGCAGTTTACGATGGCATGCATCAAAATGGAGAGAACTGAACTAGCTCAGAAAGCCGTTGATTTGGCTGAGAAAAGGTTGCCACATGATTCTTGGCCTGAGTACTATGACACACGCACAGGAAGATTTATTGGGAAACAAGCTAGGTTTAATCAAACATGGACATTAGCTGGGTTCCTTGCATCTAAGATGCTCTTGAAGGATCCTGAAATGGTATCCTTGTTATGCTGGGATGAGGATTTGCAGATTCTCGAGACATGTGTGTGTTTACTTAACAAGAGTGGCAGGGTAAGATGCTCCCGTGATGCTGCAAAGTCACAGATTCTCGTGTGA 1995 0.4231 MKPSSRIFIGLKNSSFLARCHHNLTMSMSNSNPFGLNLNHNNMHCPFRMLEFGRIMNSTQKKALGLPSSSFGQSSSLSLSATRTKERVSSIAGVAFKARDFSGSVETLVNDNNDERVYAKGGMKMKPLVVERIDKDDNKNGGGEEEESRLEDGKEDVNMENSRVLKNVSESKNNDDETEVEKEAWKLLHDALVTYCDTPVGTVAANDPGNQQPLNYDQVFIRDFIPSALAFLLKGEKDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTVKLDEEKTEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERVDVQTGLHMILHLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVAVDDGSKKLVGEINNRLSALSFHIREYYWLDMKKMNEIYRYKTEEYSMDATNKFNIFPEQIPMWLMDWIPEEGGYLIGNLQPAQMDFRFFMLGNLWSVVSSLGTPRQNKAILNLIEAKWDDLVGKMPLKICYPALEQEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTMACIKMERTELAQKAVDLAEKRLPHDSWPEYYDTRTGRFIGKQARFNQTWTLAGFLASKMLLKDPEMVSLLCWDEDLQILETCVCLLNKSGRVRCSRDAAKSQILV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03895 664 Gene3D - 209 600 IPR012341 GO:0005975
Rops8g03895 664 FunFam probable alkaline/neutral invertase B 210 616 - -
Rops8g03895 664 MobiDBLite consensus disorder prediction 130 161 - -
Rops8g03895 664 Pfam Alkaline and neutral invertase 184 623 IPR024746 GO:0033926
Rops8g03895 664 SUPERFAMILY Six-hairpin glycosidases 183 615 IPR008928 GO:0005975
Rops8g03895 664 MobiDBLite consensus disorder prediction 130 178 - -
Rops8g03895 664 PANTHER - 116 646 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03895 Rops-Chr8 79886315 79889582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03895 - - gmx:100812691 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03895 8 79886315 79889582 Rops6g01957 6 37374864 37378771 ECH
Rops8g03895 8 79886315 79889582 Rops8g03895 8 79886315 79889582 ECH
Rops8g03895 8 79886315 79889582 Rops6g01957 6 37374864 37378771 PCT