Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01957 ATGAACACAATCGCCCTTATCCGCAACCGCGCTATGAAATCCGCTCGTAGGATTCTCATTTGTTCTGGAAATTCATCGTTTTTTGGGTTACCCCCTGTAAAATGTAACCATACTCGTGCCATCGCTGACAAACCTCGTTTCAATCTTGACAATAGCAATCACTACCCTTTTCGGCGCATAATGGGTACTGCCCAGAAAGTTTTTGAATTTCCCTCTTCGAATTCTGGCCTTTCCAGGTGTTTGGGTAATAGGGATGTCTCCACAATTGCCAGGGTTTCCTTCAAGGTTCAAAATTTCTCAACCTCCATTGAGACCAGTGTTAATGACAATAATTTTGAGAGAATTTATATACAGGGTGGCATGAATGTGAAAAAGCCATTGGTGGTGGAAAGTGTTCATAAGGATGATGAGAATGTTGTAAGAGAAGATGTTTTCACAGAGAATTCAGGTGGTGGTGTGAATGTGACTGTGTCCAAGACCAGCGGGGAGGACACAGATGTGGAAAGACAAGCATGGAAGTTATTGGAGGGAGCTGTTGTGACTTATTGTGGCAACCCTGTGGGGACAGTGGCTGCAAATGATCCAGGTGACAAGCTACCATTGAATTATGATCAGGTCTTTATTAGGGATTTCATCCCTTCAGCTCTTGCCTTCTTGCTCAGAGGAGAACATGAGATTGTCAAGAACTTTCTTCTTCACACCTTGCAATTGCAGAGTTGGGAAAAAACAGTGGACTGCTACAGTCCAGGACAGGGCTTGATGCCTGCGAGTTTTAAAGTTAGAAATGTAGCTCTAGATGAAGATAATCATGAAGAAGTTTTAGATCCTGATTTTGGGGAATCGGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTGTTGCGGGCTTATGGGAAGCTCACCGGTGACTTCAGCTTGCAAGAAAGGGTGGATGTTCAAACAGGCTTGAAAATGATCCTTAACTTGTGTTTAACCGATGGTTTTGATATGTTTCCTTCCCTGCTTGTCACTGATGGGTCATGCATGATAGACCGGCGGATGGGCATTCATGGTCACCCCCTTGAAATCCAAGCATTATTTTACTCAGCTCTTCGCAGCTCACGTGAAATGCTTGCTGTAACTGATGGAACCAGTAATCTCATTAGAGCCATTAACAACAGACTCAGTGCACTATCATTCCACATAAGAGAATATTATTGGGTGGATATGAAAAAGTTGAATGAAATATACAGGTATAAAACAGAAGAATACTCCATGGATGCCATCAACAAATTCAACATCTATCCAGAACAAATTCCTTTGTGGGTAATGGATTGGATTCCAGAAAAAGGAGGATATCTGATTGGGAATCTGCAGCCAGCTCACATGGATTTCAGGTTTTTTACACTCGGAAACCTTTGGTCTATTGTTTCATCTTTGGGAACCCCAAGACAGAATGTGGCTATTTTAAATCTGATAGAAGCAAAATGGGATGATCTCGTGGGCCACATGCCTCTTAAGATATGCTACCCTGCCTTGGATAATGAAGAGTGGCGCATAATTACTGGCAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTATGTGGCAGTTCACGTTGGCATGCATCAAAATGGGGAGAATTGAACTAGCCCAGAAAGCTGTTGATTTGGCTGAGAAAAGGCTACCAGATGATTCTTGGCCTGAATACTATGATACCCGTTCCGGAAATTTTATTGGAAAACAAGCCCGGCTGTATCAGACATGGACCATAGCTGGTTTCCTTACATCCAAGATGCTTTTGAAGAATCCTAAAATGGCATCCATGTTATTTTGGGAGGAGGATTATGAGCTTCTTGAGATATGTGTTTGTGGACTTAGCAAGAGTGGCAGGAAAAAGTGTTCCCGTGTTGCTGCCAAGTCTCAGATTCTTTTGTGA 1956 0.4305 MNTIALIRNRAMKSARRILICSGNSSFFGLPPVKCNHTRAIADKPRFNLDNSNHYPFRRIMGTAQKVFEFPSSNSGLSRCLGNRDVSTIARVSFKVQNFSTSIETSVNDNNFERIYIQGGMNVKKPLVVESVHKDDENVVREDVFTENSGGGVNVTVSKTSGEDTDVERQAWKLLEGAVVTYCGNPVGTVAANDPGDKLPLNYDQVFIRDFIPSALAFLLRGEHEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVALDEDNHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDFSLQERVDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSSREMLAVTDGTSNLIRAINNRLSALSFHIREYYWVDMKKLNEIYRYKTEEYSMDAINKFNIYPEQIPLWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNVAILNLIEAKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLMWQFTLACIKMGRIELAQKAVDLAEKRLPDDSWPEYYDTRSGNFIGKQARLYQTWTIAGFLTSKMLLKNPKMASMLFWEEDYELLEICVCGLSKSGRKKCSRVAAKSQILL* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01957 651 Gene3D - 202 598 IPR012341 GO:0005975
Rops6g01957 651 FunFam probable alkaline/neutral invertase B 197 603 - -
Rops6g01957 651 SUPERFAMILY Six-hairpin glycosidases 171 602 IPR008928 GO:0005975
Rops6g01957 651 PANTHER - 99 634 IPR024746 GO:0033926
Rops6g01957 651 Pfam Alkaline and neutral invertase 171 610 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01957 Rops-Chr6 37374864 37378771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01957 - - gmx:100785091 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01957 6 37374864 37378771 Rops6g01957 6 37374864 37378771 ECH
Rops8g03895 8 79886315 79889582 Rops6g01957 6 37374864 37378771 ECH
Rops8g03895 8 79886315 79889582 Rops6g01957 6 37374864 37378771 PCT