Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03885 ATGGGGTCTGAAGGTCCTACAACACCAACAACAACAATTCACGTGACAGGATTTAAGAAATTCCATGGGGTTTCAGAGAATCCAACAGAAACAGTTGTCAATAATTTGACTGAGTACTTGAAGAAGAAAGGTTTGCCAAAAGGGTTAATTCTTGGAAGCTGCAGCATTCTTGAGACTGCTGGTCAGGAAGCACTTGTTCCACTGTACCAGAGATTACAATCCGCCATTAGTGCCAAGGACTCTGAATCTTCAAATTCCAATAGAATTATTTGGCTGCATTTTGGGGTTAACAGTGGTGCAACAAGGTTTGCTATAGAGAATCAAGCTGTCAACGAAGCTAATTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCAGATGGTGGGATTTCACGAATACGTGAGACATCACTTCCTGTTGAGGAAATCACCAAAGCCTTGGCAAAGAAGGGATATGATGTTATGATATCAGACGATGCAGGGAGGTTTGTGTGCAATTATGTTTACTATCATTCTCTTCGTTTTGCAGAGCAGAATGGGATCAAATCTCTCTTTGTGCACGTGCCACTCTTCTTGACAATAAATGAAGGGACTCAAATGCAATTTGCTGCTTCCTTGTTAGAGGTGCTTGCTTCTCTAAGTTAG 666 0.4234 MGSEGPTTPTTTIHVTGFKKFHGVSENPTETVVNNLTEYLKKKGLPKGLILGSCSILETAGQEALVPLYQRLQSAISAKDSESSNSNRIIWLHFGVNSGATRFAIENQAVNEANFRCPDEMGWKPQKVPIVPSDGGISRIRETSLPVEEITKALAKKGYDVMISDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFLTINEGTQMQFAASLLEVLASLS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03885 221 Pfam Pyroglutamyl peptidase 13 197 IPR016125 -
Rops8g03885 221 PIRSF Pyrrolidone-crbxlat_pptds 10 220 IPR000816 GO:0005829|GO:0006508|GO:0016920
Rops8g03885 221 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 218 IPR036440 -
Rops8g03885 221 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 9 219 IPR016125 -
Rops8g03885 221 Gene3D - 9 219 IPR036440 -
Rops8g03885 221 CDD Peptidase_C15 13 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Rops8g03885 221 FunFam Pyrrolidone-carboxylate peptidase isoform A 10 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03885 Rops-Chr8 79804990 79808200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03885 K01304 - gmx:100789152 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03885 8 79804990 79808200 Rops8g03885 8 79804990 79808200 ECH
Rops8g03885 8 79804990 79808200 Rops6g01967 6 37458782 37461717 PCT