Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01967 ATGGGGTCTGAAGGTCCTTCAGCAGCTGTAACAACAGTTTATTTAACAGGTTTCAAGAAATTCCATGGAGTTTCAGAGAATCCAACGGAGACAATTGTCAATAATTTGACTGAGTATATGAAGAAGAAGGGTTTACCAAAAGGTTTAGTTATTGGGAGCTGCAACATTCTTGAGACTGCTGGTCAAGCAGCACTTATTCCCCTTTACCAGACATTGCAATCTGCTATTAGTGCGAAGGATTCTGAATCTTCAAGTTCCAACAGAATTATCTGGCTGCATTTTGGGGTCAACAGTGGTGCAACAAGGTTTGCTATAGAGCGTCAAGCTGTCAATGAGGCTACCTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCAGATGGTCCGATTTCACGAATACGGGAGACTTCCATTCCTGTGGAGGAGATCACCAAGGCCTTGGCAAAGAAGGGTTATGATGTAATGACATCAGATGATGCAGGCAGGTTTGTGTGCAATTATGTTTACTATCATTCCCTTCGTTTTGCGGAGCAGAATGGGACCAAATCCCTTTTTGTGCACGTGCCACTCTTCTTTACAATTGATGAAGATATCCAAATGCAATTTGCTGCTTCCTTGTTAGAGGTACTTGCTTCAATATGTTAG 666 0.4309 MGSEGPSAAVTTVYLTGFKKFHGVSENPTETIVNNLTEYMKKKGLPKGLVIGSCNILETAGQAALIPLYQTLQSAISAKDSESSSSNRIIWLHFGVNSGATRFAIERQAVNEATFRCPDEMGWKPQKVPIVPSDGPISRIRETSIPVEEITKALAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGTKSLFVHVPLFFTIDEDIQMQFAASLLEVLASIC* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01967 221 Pfam Pyroglutamyl peptidase 13 197 IPR016125 -
Rops6g01967 221 FunFam Pyrrolidone-carboxylate peptidase isoform A 10 220 - -
Rops6g01967 221 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
Rops6g01967 221 Gene3D - 9 220 IPR036440 -
Rops6g01967 221 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 10 219 IPR016125 -
Rops6g01967 221 CDD Peptidase_C15 12 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Rops6g01967 221 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 218 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01967 Rops-Chr6 37458782 37461717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01967 K01304 - gmx:100305735 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01967 6 37458782 37461717 Rops6g01967 6 37458782 37461717 ECH
Rops8g03885 8 79804990 79808200 Rops6g01967 6 37458782 37461717 PCT