Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03776 ATGGCCCCCGAGCTTGTTCCCACTGCCGCGAAATCAGTTGCTGGGTTCAACAAACCTGCGACTCTTCCTAAACGTGCATACGTTACGTTTCTTGCTGGTAACGGTGACTACGTGAAAGGAGTTGTTGGCCTTGCCAAAGGGTTACGGAAGGTTAAAACAGCGTACCCGTTGGTAGTGGCCGTTCTCCCTGACGTGCCTGAGGAACACCGTCAGATATTGGAGTCTCAGGGATGCATCGTGCGTGAGATTGAACCCGTTTACCCACCAGAAAATCAGACTCGGTTTGCCATGGCATATTACGTCATTAACTATTCCAAGCTCCGTATATGGGAGTTTGTGGAATACAGCAAGATGATATATTTGGACGGAGATATCCAGGTTTATGAGAACATAGACCACCTGTTTGATCTGCTTGATGGTTACTTCTACGGTGTCATGGACTGCTTCTGTGAGAAGACTTGGAGTCACACCCCCCAGTACAAGATTGGGTACTGTCAACAATGCCCTGACAAGGTGAAGTGGCCCAAAGAAATGGGTCAACCCCCTTCACTTTACTTCAATGCTGGCATGTTTGTGTTTGAACCCAGCATTGACACCTACCAAGACTTATTAAAGACACTGCAAGTCACCCCTCCCACCCCATTTGCTGAACAGGATTTCCTGAACATGTATTTCAAGGACATTTACAAGCCCATTCCTTTGGTCTACAACCTTGTCCTTGCCATGTTATGGCGTCACCCGGAGAATGTTGACCTTGACAAAGTCAAGGTTGTTCACTATTGTGCAGCGGGATCGAAGCCATGGAGATATACTGGGAAGGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGCAGAAATGGTGGGAAACCTACAATGATCCTTCACTTGACTATGAGATGTACTTGAGTGGAACTCAAGGACCAGTGGATGGTGTTGACATTGAGCCATTCGTACAGGCTCTATCAGAGGTTGGTGAGGTTCGATACGTCACAGCACCCTCTGCAGCTTAA 1017 0.4759 MAPELVPTAAKSVAGFNKPATLPKRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRQILESQGCIVREIEPVYPPENQTRFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYENIDHLFDLLDGYFYGVMDCFCEKTWSHTPQYKIGYCQQCPDKVKWPKEMGQPPSLYFNAGMFVFEPSIDTYQDLLKTLQVTPPTPFAEQDFLNMYFKDIYKPIPLVYNLVLAMLWRHPENVDLDKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVQKWWETYNDPSLDYEMYLSGTQGPVDGVDIEPFVQALSEVGEVRYVTAPSAA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03776 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 295 IPR029044 -
Rops8g03776 338 FunFam Hexosyltransferase 23 301 - -
Rops8g03776 338 CDD GT8_Glycogenin 25 295 - -
Rops8g03776 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 298 IPR029044 -
Rops8g03776 338 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 295 - -
Rops8g03776 338 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03776 Rops-Chr8 78356010 78358133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03776 1 338 Glycosyltransferase AT1G56600 72.271 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03776 K18819 - gmx:100809287 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03776 8 78356010 78358133 Rops8g03776 8 78356010 78358133 ECH
Rops8g03776 8 78356010 78358133 Rops6g01963 6 37421071 37422777 ECH