Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03729 ATGGCAGTCACTACTCATTCTCCAAACGCTACAGAGAAGAAACACTGGTGGCTTACCAACCGAAAGATTGTTGAGAAATACATCAAAGATGCTCGTAGTTTGATAGCGACGCAAGAACAGAGCGAGATCGCTTCGGCTCTGAACCTTCTAGACGCTGCTCTGGCCATTTCTCCGAAGCTGGACCAGGCTCTTGAGCTGAGAGCGAGATCGTTGCTTTATTTGCGACGGTTCAAAGACGTCGCTGATATGCTTCAGGACTACATTCCAAGTTTAAGAATGGCGAACGAAGACCCCAGTTCCTCTGTTTCTTCCGATAGCTCATCACAACAACTTTCTAGGGAAGGAGTGAAGCTTCTCTCCGGTGACTCACTGGTTCGAGATCAGAGTTTCAAGTGCTTCTCTGTCTCAGACCTCAAGAAGAAGGTCATGGCAGGTCTGTGTAAAAGTTGTGACAAGGAAGGGCAATGGAGATACTTGGTTCTGGGTGAAGCATGTTGCCATTTAGGCCTAATGGAAGATGCCATGGCTCTTCTGCAAACCGGAAAACGCCTTGCCAGCGCGGCATTCCGGCGAGAGAGTGTGTGTTGGGCCGATGACAGTTTTTCTCTATCAAAGATTCCCTTCGCCGGAGACACCACAAACCCACCACCAACCACTCCACCACGAGCCCCTATAACTGATTCAGAGAGTGTCACGCAACTCCTCAGCCACATAAAGTTCCTTCTCCGCCGTCGTGCCGCCGCACTTGCCGCCCTCGACGCTGGACTCTACTCAGAAGCCATCCGCCACTTCTCCAAAATCGTCGACGGCCGCCGTGTCGCCCCACAAGGCTTCCTCGCCGAGTGTTACATGCACAGAGCCTCTGCGCACCGTTTAGCAGGTCGAATTGCAGAGTCAATCGCGGATTGTAACCGTACCCTTGCCCTTGACCCCACTTGCATTCAAGCCCTTGACACAAGAGCTTCACTTTTTGAAACCATTCGTTGTTTACCAGATTCTCTTCACGATCTTGAACACTTGAAGCTTCTTTATAACTCAATCTTGCGTGATCGTAAGCTTCCTGGTCCTGCATGGAAGCGCCACAACGTGAGGTACAGGGAGATTCCTGGTAAACTCTGTGCTCTCACAACAAAGATTCAAGAACTGAAGAGAAGGTTGGCTTCAGGGGAAACTGGTAGTGTTGATTACTATGCTTTAATTGGAGTACGACGTGGGTGTTCTCGTTCAGAGTTGGAGAGGGCTCATGTTTTGTTGTGTCTGAGACACAAGCCTGATAAAGCTACGAACTTTATAGAAAGGTGTGAGCTTGCGGATGAACGTGATATTGAATCAGTTATGGAGAGAGCAAAGATGTCAGCTTTGTTGTTGTATAGATTGGTTCAGAAGGGTTACACAAGTGTCATGGCTACCATTTTGGATGAGGAAGCTGCTGAGAAACAAAGGAAGAAAACTGCTTCTGCTTTGCAAGCAGCTACAGCACAAGCAGTGGCAATTCAAGTGAACAAAACAACTGAACAACAACATGAGTTGAATAAGCCTGATAAGAGGAACATCAATGTTTCTGTGGAAGACAACAAGTCTACGATGATATCTTCTTCTGATGTGAATCCTGCAGTGTTTCAAGGTGTTTTTTGCCGTGATCTTACGGTGGTTGGGAACTTGCTTTCTCAGGTGGGATTTAATCGACCAATTCCGGTGAAGTATGAAGCTTTGAGCTGCTAA 1722 0.4779 MAVTTHSPNATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEIASALNLLDAALAISPKLDQALELRARSLLYLRRFKDVADMLQDYIPSLRMANEDPSSSVSSDSSSQQLSREGVKLLSGDSLVRDQSFKCFSVSDLKKKVMAGLCKSCDKEGQWRYLVLGEACCHLGLMEDAMALLQTGKRLASAAFRRESVCWADDSFSLSKIPFAGDTTNPPPTTPPRAPITDSESVTQLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRVAPQGFLAECYMHRASAHRLAGRIAESIADCNRTLALDPTCIQALDTRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKRRLASGETGSVDYYALIGVRRGCSRSELERAHVLLCLRHKPDKATNFIERCELADERDIESVMERAKMSALLLYRLVQKGYTSVMATILDEEAAEKQRKKTASALQAATAQAVAIQVNKTTEQQHELNKPDKRNINVSVEDNKSTMISSSDVNPAVFQGVFCRDLTVVGNLLSQVGFNRPIPVKYEALSC* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03729 573 SUPERFAMILY Chaperone J-domain 391 429 IPR036869 -
Rops8g03729 573 Gene3D Tetratricopeptide repeat domain 46 499 IPR011990 GO:0005515
Rops8g03729 573 PANTHER OS01G0273500 PROTEIN 9 573 - -
Rops8g03729 573 SMART dnaj_3 394 476 IPR001623 -
Rops8g03729 573 SMART tpr_5 280 313 IPR019734 GO:0005515
Rops8g03729 573 MobiDBLite consensus disorder prediction 207 226 - -
Rops8g03729 573 SUPERFAMILY TPR-like 246 341 IPR011990 GO:0005515
Rops8g03729 573 CDD DnaJ 395 429 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03729 Rops-Chr8 77700648 77703528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03729 - - gmx:100808420 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03729 8 77700648 77703528 Rops8g03729 8 77700648 77703528 ECH
Rops8g03729 8 77700648 77703528 Rops6g02089 6 39002848 39005499 PCT