Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02089 ATGGCTGTCACTACTCCCTGTCTCAATGCTACAGAAAAGAAGCACTGGTGGCTCACCAACCGTAAGATTGTTGAGAAATATATCAAAGATGCTCGCAGCCTGATTGCGACGCAAGAACATGGCGAGATCGTTTCGGCTCTGAATCTTGTAGATGCGGCTCTGGCTATATCTCCACGCCTAGACCAAGCTCTAGAACTCAGAGCAAGGTCACTTCTCTATTTGCGGAGGTTCAAAGAGGTAGCTGATATGCTTCAGGACTACATTCCGAGCCTGAAAATGGCAAATGATGATTCCGGCTCTGTTTCTTCGGATAGCTCATCTCAGCAGCTTTCAAGGGAAGGAGTGAAGCTACTCTCTTCATCGGATTCCCCTGTTCCAGATCAGAGTTTCAAGTGCTTCTCTGTCTCTGACTTGAAGAAGAGAGTCATGGCAGGACTTTGTAAAAGTTGCGACAAGGAAGGGTATTGGAGATACTTGGTTTTGGGCAAAGCATGTTGCCACCTAGGCCTAATGGAGGACGCAATGGTTCTTCTCCAAACAGGTAAACGACTAGCCAGCGCCGCGTTTCGCCGTGAGAGTGTGTGTTGGTCGGACGACAGCTTCTCACTGTGGAACACACCGTTCTCCGGAGACGCCCCCATCCCTCTCACGGAATCCGAAACAGTCAACCAACTCCTTGCACACATCAAGTTCCTCCTCCGGCGACGCGCCTCCGCGCTCGCCGCCCTTGATGCCGGTCTCCACTCAGAAGCCATCCGTCACTTCTCTAAAATCGTCGATGGCCGCCGCGGCGCCCCACAAGGGTTCCTCGCTGAATGTTACATGCACAGAGCCACCGCATACCGTTCAGCAGGTAGAATCGCCGATTCAATCGCCGACTGTAACAGAACACTGACGCTGGACCCCACTTGTATTCAAGCTCTTGAAGCCAGAGCCTCTCTTCTAGAATCCATTCGTTGCTACCCAGATTGCTTACACGACCTTGAACACCTGAAACTCTTATACAACTCAATCTTACGCGACCGTAAACTCGCTGGTCCTGCATGGAAGCGCCAAAACACACGCTACGGCGAGATTCCGGGGAAACTCTGCACCCTCACTGCGAAGATTCAACAACTGAAACAAAGGTTAGCTTCTGGAGAAACCGGTAATGTTGATTACCACGCTTTGATCGGGTTAGGACGTGGGTGTGGTCGTTCAGAGTTGCAAAGAGCTCACCTTTTGTTGTGTTTGAAACACAAGCCTGATAAAGCTATTACTTTTATCGAACGTTGTGAGTTAGCTGATGAACGTGATCTTGAATCTGTTAAAGACAGGGCGAGGATGTCGGCGTTGTTGTTGTATAGGTTGCTTCAGAAGGGTTATTCAAATGTGATGGCTACGATTATGGAAGAAGAGGCTGCAGAGAAACAAAGGAAGAAGGCTTTGTTACAAACCGCACATGTTCAAGTGCAACGACAGACAACAATCGATGAAGGGAACAATAATAATAATAATAATAAGACACCTAAATTGGGGGATAAGTGTGCTATGTCTTCTCCTTCTATTGTGAATCCCTCTGTTTTTCAAGGTGTGTTTTGCCGTGATCTCTCTGTGGTTGGGAACTTGCTTTCTCAAGCGAGGTTCAATCGTTCGATTCCGGTGAAGTACGAGGCATTGAGTTGCTGA 1668 0.4856 MAVTTPCLNATEKKHWWLTNRKIVEKYIKDARSLIATQEHGEIVSALNLVDAALAISPRLDQALELRARSLLYLRRFKEVADMLQDYIPSLKMANDDSGSVSSDSSSQQLSREGVKLLSSSDSPVPDQSFKCFSVSDLKKRVMAGLCKSCDKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLWNTPFSGDAPIPLTESETVNQLLAHIKFLLRRRASALAALDAGLHSEAIRHFSKIVDGRRGAPQGFLAECYMHRATAYRSAGRIADSIADCNRTLTLDPTCIQALEARASLLESIRCYPDCLHDLEHLKLLYNSILRDRKLAGPAWKRQNTRYGEIPGKLCTLTAKIQQLKQRLASGETGNVDYHALIGLGRGCGRSELQRAHLLLCLKHKPDKAITFIERCELADERDLESVKDRARMSALLLYRLLQKGYSNVMATIMEEEAAEKQRKKALLQTAHVQVQRQTTIDEGNNNNNNNKTPKLGDKCAMSSPSIVNPSVFQGVFCRDLSVVGNLLSQARFNRSIPVKYEALSC* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02089 555 SUPERFAMILY TPR-like 238 334 IPR011990 GO:0005515
Rops6g02089 555 PANTHER OS01G0273500 PROTEIN 4 555 - -
Rops6g02089 555 SMART tpr_5 155 188 IPR019734 GO:0005515
Rops6g02089 555 SMART tpr_5 271 304 IPR019734 GO:0005515
Rops6g02089 555 Gene3D Tetratricopeptide repeat domain 39 500 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02089 Rops-Chr6 39002848 39005499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02089 - - gmx:106797171 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02089 6 39002848 39005499 Rops6g02089 6 39002848 39005499 ECH
Rops8g03729 8 77700648 77703528 Rops6g02089 6 39002848 39005499 PCT